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SCNpilot_expt_1000_bf_scaffold_2285_curated

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2285_curated_1
unknown

Not on your lists

comp(372..560)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2285_curated_2
Sinorhizobium phage phiLM21, Caudovirales, Viruses

Not on your lists

762..1196
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Rhizobium meliloti RepID=UPI000318BEC4
Terminase small subunit {ECO:0000313|EMBL:AII27789.1}; TaxID=1524882 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Sinorhizobium phage phiLM21.;"
hypothetical protein; K07474 phage terminase small subunit
SCNpilot_expt_1000_bf_scaffold_2285_curated_3
Sinorhizobium phage phiLM21, Caudovirales, Viruses

Not on your lists

1160..2599
DNA (1440bp) protein (480aa)
Phage terminase, large subunit, PBSX family n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HS70_9RHIZ
Terminase large subunit {ECO:0000313|EMBL:AII27790.1}; TaxID=1524882 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Sinorhizobium phage phiLM21.;"
terL4; putative prophage terminase large subunit; K06909
SCNpilot_expt_1000_bf_scaffold_2285_curated_4
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2607..3989
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI0002F879BC
CRISPR-associated protein; K09961 hypothetical protein
Phage-associated protein, HI1409 family {ECO:0000313|EMBL:ACI55705.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_2285_curated_5
unknown

Not on your lists

comp(3992..4189)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2285_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4263..5408
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CIC0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81395.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K09960 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2285_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5408..5872
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYG3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81394.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_2285_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5884..6822
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D775_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81393.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2285_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6834..7139
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2S0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81392.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_2285_curated_10
unknown

Not on your lists

comp(7155..7703)
DNA (549bp) protein (183aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2285_curated_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7775..8263
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti (strain SM11) RepID=F7X9I2_SINMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH79090.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;"
SCNpilot_expt_1000_bf_scaffold_2285_curated_12
unknown

Not on your lists

8266..8640
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2285_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8640..8996
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNS0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71749.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_expt_1000_bf_scaffold_2285_curated_14
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8996..10057
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035D5547
Phage head morphogenesis protein, SPP1 gp7 {ECO:0000313|EMBL:EJN04235.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
putative head morphogenesis protein SPP1 gp7
SCNpilot_expt_1000_bf_scaffold_2285_curated_15
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10057..10578
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000360BA65
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL58453.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_expt_1000_bf_scaffold_2285_curated_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10973..11173
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LM05_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71746.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying 16 items

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