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SCNpilot_expt_1000_bf_scaffold_3641_curated

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3641_curated_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1123)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJM9_XANP2
hypothetical protein; K07445 putative DNA methylase
Uncharacterized protein {ECO:0000313|EMBL:ABS68222.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_3641_curated_2
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1131..2762)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002376574
Uncharacterized protein {ECO:0000313|EMBL:KIC60499.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_3
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2773..6288)
DNA (3516bp) protein (1172aa)
Helicase domain protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJM6_XANP2
RNA helicase {ECO:0000313|EMBL:KIC60498.1}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
helicase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_4
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6311..7195)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IJM5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68218.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_expt_1000_bf_scaffold_3641_curated_5
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7324..7467
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G3C8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98165.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
SCNpilot_expt_1000_bf_scaffold_3641_curated_6
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7592..10189
DNA (2598bp) protein (866aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HKR4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98183.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_7
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10186..13584
DNA (3399bp) protein (1133aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
ATP-dependent endonuclease n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GDQ6_9SPHN
UvrD/REP helicase
SCNpilot_expt_1000_bf_scaffold_3641_curated_8
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13599..16940
DNA (3342bp) protein (1114aa)
Helicase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GC04_9SPHN
Helicase {ECO:0000313|EMBL:EQA98181.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
type III restriction protein res subunit
SCNpilot_expt_1000_bf_scaffold_3641_curated_9
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17008..17985)
DNA (978bp) protein (326aa)
Helicase domain-containing protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FTE3_RHIML
Helicase domain-containing protein {ECO:0000313|EMBL:EHK79831.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
helicase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_10
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18027..20171)
DNA (2145bp) protein (715aa)
Helicase domain-containing protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FTE3_RHIML
Helicase domain-containing protein {ECO:0000313|EMBL:EHK79831.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
helicase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_11
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20168..21337)
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FTE4_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK79832.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_12
unknown

Not on your lists

22025..22525
DNA (501bp) protein (167aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3641_curated_13
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22729..23199)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti CCNWSX0020 RepID=H0FTE5_RHIML
Putative uncharacterized protein {ECO:0000313|EMBL:EHK79833.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_14
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23199..24419)
DNA (1221bp) protein (407aa)
ATPase AAA n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GDQ0_9SPHN
ATPase AAA {ECO:0000313|EMBL:EQA98177.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein; K07133
SCNpilot_expt_1000_bf_scaffold_3641_curated_15
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24684..25877
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GBZ8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98176.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_16
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26051..28171
DNA (2121bp) protein (707aa)
Plasmid partitioning protein ParB n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G3E0_9SPHN
Plasmid partitioning protein ParB {ECO:0000313|EMBL:EQA98175.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
ParB-like protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_3641_curated_17
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28271..28687
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HFI3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98174.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_18
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28684..28950
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HKQ0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98173.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_19
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28947..29243
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GDP5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98172.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_20
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29399..32542
DNA (3144bp) protein (1048aa)
Methylase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GBZ2_9SPHN
Methylase {ECO:0000313|EMBL:EQA98171.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
putative methylase/helicase
SCNpilot_expt_1000_bf_scaffold_3641_curated_21
unknown

Not on your lists

comp(32350..33054)
DNA (705bp) protein (235aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3641_curated_22
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33202..33618
DNA (417bp) protein (139aa)
Methylase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GBZ2_9SPHN
Methylase {ECO:0000313|EMBL:EQA98171.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
putative methylase/helicase
SCNpilot_expt_1000_bf_scaffold_3641_curated_23
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33618..34658
DNA (1041bp) protein (347aa)
DNA primase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0G3D5_9SPHN
DNA primase {ECO:0000313|EMBL:EQA98170.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_24
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34977..35903
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HFH8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA98169.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_25
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36775..36942
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HJS5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99604.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_26
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37083..37322
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPX4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99603.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3641_curated_27
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37304..37522
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPX4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA99603.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
hypothetical protein
Displaying 27 items

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