name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4539_curated_1
Brucella microti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..395)
|
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:ACU48798.1}; EC=1.2.1.27 {ECO:0000313|EMBL:ACU48798.1};; TaxID=568815 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella microti (strain CCM 4915).;"
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=15 Tax=Brucella ovis RepID=A5VSH2_BRUO2
|
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SCNpilot_expt_1000_bf_scaffold_4539_curated_2
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
685..1563
|
Transcriptional regulator n=1 Tax=Phyllobacterium sp. YR531 RepID=J2VZ85_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:EJN05540.1}; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1972..4050
|
Methyl-accepting chemotaxis protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2PEG6_9RHIZ
Chemoreceptor McpA {ECO:0000313|EMBL:EYR82171.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
mcpA; methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_4
Rhizobium sp. H41, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4195..4440
|
Uncharacterized protein n=2 Tax=Rhizobium RepID=U4Q7P6_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGE80225.1}; TaxID=1510041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. H41.;"
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SCNpilot_expt_1000_bf_scaffold_4539_curated_5
unknown
|
Not on your lists |
comp(4660..5310)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5583..6257
|
UPI0003CFD76E related cluster n=1 Tax=unknown RepID=UPI0003CFD76E
Uncharacterized protein {ECO:0000313|EMBL:CDX40623.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_7
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6539..6877
|
Uncharacterized protein n=6 Tax=Rhizobium meliloti RepID=F6BVY1_SINMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG05027.1}; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
|
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SCNpilot_expt_1000_bf_scaffold_4539_curated_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6965..7198)
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Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X507_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL50963.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_9
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7496..8401
|
Bifunctional mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase protein {ECO:0000313|EMBL:AJD42298.1}; EC=2.7.7.13 {ECO:0000313|EMBL:AJD42298.1};; EC=5.3.1.8 {ECO:0000313|EMBL:AJD42298.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JA96_AGRRK
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_10
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8398..8901
|
bifunctional mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase protein (EC:5.3.1.8 2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Rhizobium sp. CF142 RepID=J1T418_9RHIZ
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EJJ26386.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
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SCNpilot_expt_1000_bf_scaffold_4539_curated_11
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8959..9408)
|
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K1W3_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM38861.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
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SCNpilot_expt_1000_bf_scaffold_4539_curated_12
unknown
|
Not on your lists |
comp(9409..9624)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_13
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9707..10195)
|
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI00036FCB11
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGP62855.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
Uncharacterized HTH-type transcriptional regulator y4tD
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_14
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10422..11564
|
Cys; K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cys n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR74_RHOCS
Cys {ECO:0000313|EMBL:ACI97960.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
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SCNpilot_expt_1000_bf_scaffold_4539_curated_15
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11588..13162
|
Extracellular solute-binding protein family 5 n=2 Tax=Rahnella RepID=E8XXV5_RAHSY
family 5 extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
Family 5 extracellular solute-binding protein {ECO:0000313|EMBL:AFE57933.1}; TaxID=1151116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis HX2.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_16
Pantoea sp. At-9b, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13541..14488
|
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pantoea sp. (strain At-9b) RepID=E6WH29_PANSA
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU71017.1}; Flags: Precursor;; TaxID=592316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. (strain At-9b).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_17
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14494..15264
|
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TC37_DESML
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EPR34110.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_18
Ewingella americana, Ewingella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15270..16916
|
Alpha-glucoside transport ATP-binding protein {ECO:0000313|EMBL:KFC83295.1}; EC=3.6.1.15 {ECO:0000313|EMBL:KFC83295.1};; EC=3.6.1.3 {ECO:0000313|EMBL:KFC83295.1};; TaxID=910964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Ewingella.;" source="Ewingella americana ATCC 33852.;"
ABC transporter n=1 Tax=Rahnella aquatilis HX2 RepID=H8NQ42_RAHAQ
ABC transporter
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_19
unknown
|
Not on your lists |
17315..17692
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_20
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17711..18814)
|
Putative cysteine synthase {ECO:0000313|EMBL:CCE04906.1}; EC=2.5.1.47 {ECO:0000313|EMBL:CCE04906.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
cysteine synthase/cystathionine beta-synthase family protein; K01738 cysteine synthase A [EC:2.5.1.47]
Putative cysteine synthase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TEN7_9BRAD
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_21
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18841..19263)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036701A2
Strain MEJ076 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ01843.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_22
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19260..19514)
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NHL9_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB06227.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19714..20553)
|
Putative allantoin catabolism protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW12_RHITR
putative allantoin catabolism protein
Putative allantoin catabolism protein {ECO:0000313|EMBL:AGB74344.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
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SCNpilot_expt_1000_bf_scaffold_4539_curated_24
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20982..21326
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhizobium sp. RepID=L0NMB0_RHISP
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCF21946.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_25
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21392..22492
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhizobium sp. RepID=L0NMB0_RHISP
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCF21946.1}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_26
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22606..24399)
|
Diguanylate cyclase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HN39_9RHIZ
Putative response regulator/GGDEF domain transcriptional regulator {ECO:0000313|EMBL:AHK45406.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
diguanylate cyclase
rbh
|
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SCNpilot_expt_1000_bf_scaffold_4539_curated_27
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24580..25101
|
Acetyltransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CG89_9RHIZ
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:AKI03034.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
acetyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_28
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25104..25499)
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2I5F6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL51095.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_29
unknown
|
Not on your lists |
comp(25459..25602)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4539_curated_30
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25589..25870)
|
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000371E4CA
Nucleotidyltransferase family protein {ECO:0000313|EMBL:EJL51094.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
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