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SCNpilot_expt_1000_bf_scaffold_10055_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_10055_curated_1
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1206
DNA (1206bp) protein (402aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CL92_9RHIZ
CoA-transferase {ECO:0000313|EMBL:KGF69468.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_10055_curated_2
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1284..2402)
DNA (1119bp) protein (373aa)
Transcriptional regulator, AraC family n=1 Tax=Rhodobacter sp. SW2 RepID=C8RY23_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF69470.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_10055_curated_3
unknown

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comp(2392..4938)
DNA (2547bp) protein (849aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_10055_curated_4
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5408..6190
DNA (783bp) protein (261aa)
Dipeptide ABC transporter permease n=2 Tax=Brucella RepID=C9V4D9_BRUNE
D-ala-D-ala transporter subunit {ECO:0000313|EMBL:KGF69473.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
peptide ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_10055_curated_5
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6194..7204
DNA (1011bp) protein (337aa)
peptide ABC transporter ATP-binding protein n=1 Tax=Nonomuraea coxensis RepID=UPI0003785D09
Uncharacterized protein {ECO:0000313|EMBL:EXL10541.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
glutathione import ATP-binding protein GsiA; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_10055_curated_6
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7201..8226
DNA (1026bp) protein (342aa)
Peptide ABC transporter, ATP-binding protein n=1 Tax=Brucella microti (strain CCM 4915) RepID=C7LJK0_BRUMC
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EXL10540.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
peptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_10055_curated_7
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8223..9539
DNA (1317bp) protein (439aa)
Type III effector Hrp-dependent outer domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8A7_MESCW
Membrane protein {ECO:0000313|EMBL:EXL10539.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
type III effector Hrp-dependent outer domain-containing protein
SCNpilot_expt_1000_bf_scaffold_10055_curated_8
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9544..10200
DNA (657bp) protein (219aa)
class II aldolase/adducin family protein; K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
UPI0003CFDF15 related cluster n=1 Tax=unknown RepID=UPI0003CFDF15
Fuculose phosphate aldolase {ECO:0000313|EMBL:KGF69474.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
Displaying 8 items

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