ggKbase home page

SCNpilot_expt_1000_bf_scaffold_8236_curated

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8236_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..209
DNA (207bp) protein (69aa)
Nitric oxide reductase subunit B {ECO:0000313|EMBL:EYR78631.1}; EC=1.7.2.5 {ECO:0000313|EMBL:EYR78631.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nitric-oxide reductase; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
Nitric oxide reductase subunit B n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEU4_9RHIZ
tiny fragment, connects to SCNpilot_expt_1000_bf_scaffold_4618_curated_27 Rose Kantor (12/9/15)
SCNpilot_expt_1000_bf_scaffold_8236_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

317..1123
DNA (807bp) protein (269aa)
Protein NorQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUT2_9RHIZ
MoxR-like ATPase {ECO:0000313|EMBL:EYR78632.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
denitrification regulatory protein NirQ; K04748 nitric oxide reductase NorQ protein
SCNpilot_expt_1000_bf_scaffold_8236_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1132..3030
DNA (1899bp) protein (633aa)
protein norD n=1 Tax=Rhizobium radiobacter RepID=UPI0003600E2D
Nitric oxide reductase activation protein {ECO:0000313|EMBL:EYR78633.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
norD; NorD protein required for nitric oxide reductase (Nor) activity
SCNpilot_expt_1000_bf_scaffold_8236_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3101..4261)
DNA (1161bp) protein (387aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hemN; coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Oxygen-independent coproporphyrinogen-III oxidase HemN n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJU0_9RHIZ
Displaying 4 items

View Taxonomy