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SCNpilot_expt_1000_bf_scaffold_6300_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6300_curated_1
unknown

Not on your lists

624..902
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6300_curated_2
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

959..1276
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Meganema perideroedes RepID=UPI00036A26FD
resolvase domain-containing protein
Resolvase, N-terminal domain {ECO:0000313|EMBL:ABQ69730.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_expt_1000_bf_scaffold_6300_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1925..2251)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:CDN96100.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_6300_curated_4
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2235..2606)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HLS1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KEQ05766.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
SCNpilot_expt_1000_bf_scaffold_6300_curated_5
Rhizobium phage vB_RglS_P106B, Caudovirales, Viruses

Not on your lists

comp(2820..3059)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U8G4_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AHJ10724.1}; TaxID=1458697 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage vB_RglS_P106B.;"
SCNpilot_expt_1000_bf_scaffold_6300_curated_6
Rhizobium phage vB_RglS_P106B, Caudovirales, Viruses

Not on your lists

comp(3059..4099)
DNA (1041bp) protein (347aa)
Lysozyme {ECO:0000256|RuleBase:RU003788, ECO:0000313|EMBL:AHJ10723.1}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1458697 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage vB_RglS_P106B.;"
hypothetical protein ORF033 n=1 Tax=Pseudomonas phage PA11 RepID=UPI0001554371
Lysozyme
SCNpilot_expt_1000_bf_scaffold_6300_curated_7
unknown

Not on your lists

comp(4133..5140)
DNA (1008bp) protein (336aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6300_curated_8
unknown

Not on your lists

comp(5137..5766)
DNA (630bp) protein (210aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6300_curated_9
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..6647)
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IP72_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KDP84713.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6300_curated_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6649..7026)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JR00_DESFR
Phage protein {ECO:0000313|EMBL:KHK02791.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
Displaying 10 items

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