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SCNpilot_expt_1000_bf_scaffold_6248_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6248_curated_1
unknown

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comp(2..112)
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6248_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(257..1396)
DNA (1140bp) protein (380aa)
Replication protein A n=2 Tax=Agrobacterium RepID=Q7CTM7_AGRT5
Plasmid partitioning protein RepA {ECO:0000313|EMBL:CDN94859.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
repA; replication protein A
SCNpilot_expt_1000_bf_scaffold_6248_curated_3
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1597..2544)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00037FD150
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGS24363.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_expt_1000_bf_scaffold_6248_curated_4
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2903..4345
DNA (1443bp) protein (481aa)
aldehyde dehydrogenase (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase n=2 Tax=Agrobacterium RepID=F0LC63_AGRSH
Aldehyde dehydrogenase {ECO:0000313|EMBL:KJF69081.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
SCNpilot_expt_1000_bf_scaffold_6248_curated_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4500..5303
DNA (804bp) protein (268aa)
Bifunctional deaminase-reductase domain-containing protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q706_9RHIZ
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EKF59474.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Bifunctional deaminase-reductase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_6248_curated_6
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5259..5819)
DNA (561bp) protein (187aa)
Methyltransferase type 11 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAX1_9RHIZ
Methyltransferase type 11 {ECO:0000313|EMBL:EHS50038.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
type 12 methyltransferase
SCNpilot_expt_1000_bf_scaffold_6248_curated_7
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6027..6419)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI00037DB222
Glycosyl transferase group 1 {ECO:0000313|EMBL:EHS50037.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_6248_curated_8
unknown

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6678..6914
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 8 items

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