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SCNpilot_expt_1000_bf_scaffold_716_curated_12

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 8697..10061

Top 3 Functional Annotations

Value Algorithm Source
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 448.0
  • Bit_score: 346
  • Evalue 6.00e-92
cell cycle protein MesJ/cytosine deaminase-related protein; K04075 tRNA(Ile)-lysidine synthase [EC:6.3.4.19] similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 460.0
  • Bit_score: 326
  • Evalue 1.10e-86
tRNA(Ile)-lysidine synthase n=1 Tax=Rhizobium sp. AP16 RepID=J2W737_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 432.0
  • Bit_score: 329
  • Evalue 5.40e-87

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
GTGACGTTTTCCGTCACGCCGCAAGCGGCGGTCGACCGCTTTCTCTCCAGCCTCACCGAACCCGCTCGCCTGATGGTCGCCGTTTCCGGCGGCGGCGATTCGATCGGACTGCTGTTTTTCCTGCATGAAGCGATGCGCGACGGCCGCCATCCGCATGTCTCGCTCTGCGCGGCAACGGTCGATCACGGCCTGCGGCCGGAATCGTCGGCGGAAGCCGCCGCCGTCGCTGCCTTCTGCGAAGAACGCGCCATTCAGCATCGCATCCTCGTCTGGGAAGGGCCGAAACCGGTCAGCGGCCTTGCCGCCGCCGCGCGCGAGGCGCGCTACGGCCTGCTGGCCGATGCCGCCGAGGTCTTTGGCGCCGGCCTGATCCTCTCCGCCCACACCGCTGACGACCAGGTCGAGACGGCCGCGATGCGGGCCGAGCGCAACGGCGATGCCTTGAGCCCCGGCCTTGCCGGCATGGCCCCGGCCGTGCTGCTCGGCGGCCGCGTCTGGCTCGTGCGCCCGCTGCTCGATTGCCGCCGTGCCCATATTCGCGCGCTGCTCGAAGACAGCGGCATCGGCTGGTTCGACGACCCCTCCAACGACAATGCCGCCTATGAGCGTCCCCGCCAGCGCCGCCGCCTTCGGGGCGCCGACATGGCGGCCGCGCTGGACGACATCCGCCGTGCGCAACGGCGCCGCTACGCGCTGTCGGCGGCGGCGGCTTCTTTCATTCGCGATGGCGTGACGGTGCATGGCGGCGCGGTCGCGGTGGTGGAGCGCACGGCCTTGCAAGATGTGGACGACGATGTGCTGGCCTATGGTCTTGCCGCCCTTGCCGCCGTCATCGGCGGCCGGCCGCATCCGCTGTCGGCGAACCGCATGTTGCAGGTCGTCGGCCTCTGCCGCACGGAGGAACTGACCCGTCTCAACATCGGCCGCGTCGTCTTCGACCAGCGCCGCGAGGCGCTGTTCCTGACCCGCGAGGCGCGCGGTATTTTGTCGCTGACGCTGGCGGCAGGGGGCAGCGGCATCTGGGACGGACGCTACCGTGTCGAAAATGCAGGCGATTCTCCCGTCACCGTCCTTGCCGCCGGCAGCCCAGGGCAAAGGATCGCGCCGAGCCTGTTTCCGGACGTGCCTTCCGGCGTCGCCCTCCGCGCCGCAGCGGCGCTTCCTGCCTGTTCCAGCGCGGCCGGGCCCGTTCCGCTCACCGGGCCGCCCCGGCCGTCATGGTTGACGGTCGGTTATTTTCTCGCCCCCTTCGACCGCTTTTTGCCATTGTTCGATGCGATGCTCGCCCGCGAGATTGCCTTGAAATTCGCCCGGCCATGCGCCGGCATACCGTTTCGCGGCCTGTCGACGGAAAACGAATGTTGA
PROTEIN sequence
Length: 455
VTFSVTPQAAVDRFLSSLTEPARLMVAVSGGGDSIGLLFFLHEAMRDGRHPHVSLCAATVDHGLRPESSAEAAAVAAFCEERAIQHRILVWEGPKPVSGLAAAAREARYGLLADAAEVFGAGLILSAHTADDQVETAAMRAERNGDALSPGLAGMAPAVLLGGRVWLVRPLLDCRRAHIRALLEDSGIGWFDDPSNDNAAYERPRQRRRLRGADMAAALDDIRRAQRRRYALSAAAASFIRDGVTVHGGAVAVVERTALQDVDDDVLAYGLAALAAVIGGRPHPLSANRMLQVVGLCRTEELTRLNIGRVVFDQRREALFLTREARGILSLTLAAGGSGIWDGRYRVENAGDSPVTVLAAGSPGQRIAPSLFPDVPSGVALRAAAALPACSSAAGPVPLTGPPRPSWLTVGYFLAPFDRFLPLFDAMLAREIALKFARPCAGIPFRGLSTENEC*