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SCNpilot_expt_1000_bf_scaffold_2130_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(9182..9412)

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXU0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 104
  • Evalue 3.70e-20
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:EYR83938.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.8
  • Coverage: 72.0
  • Bit_score: 104
  • Evalue 5.20e-20
C4-dicarboxylate transport transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 75.0
  • Bit_score: 87
  • Evalue 1.50e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGACGCCCGGCACGGTGGCTGGGGGCTCGTCCGCGACGGATACGCAACCTGGATCGTTGCCGGAACGACTGGAGCGGCTCGAAGCGGAAATCATCCGCGAGACTCTCACGGCCCATGGAGGCAATGTGCAGGAAACGATCGCCGCACTTCAAATCCCGCGCAAGACATTTTACGACAAGCTCCAGCGCCATGGCATCGTGCGCCGTGAGTTCATCGGCAGTTCCAGGTGA
PROTEIN sequence
Length: 77
MTPGTVAGGSSATDTQPGSLPERLERLEAEIIRETLTAHGGNVQETIAALQIPRKTFYDKLQRHGIVRREFIGSSR*