name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2130_curated_1
bacterium YEK0313, Bacteria
|
Not on your lists |
comp(1..948)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLS3_BRAJP
Flavin-dependent monooxygenase, oxygenase subunit HsaA {ECO:0000313|EMBL:CEJ11938.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_2
bacterium YEK0313, Bacteria
|
Not on your lists |
1174..1719
|
NADPH-dependent FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
FMN reductase, MsuE subfamily n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z4E7_9RHIZ
NAD(P)H-dependent FAD/FMN reductase {ECO:0000313|EMBL:CEJ11937.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_3
bacterium YEK0313, Bacteria
|
Not on your lists |
1730..3010
|
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DLS5_BRAJP
4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase {ECO:0000313|EMBL:CEJ11936.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_4
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3133..4416
|
major facilitator transporter n=1 Tax=Ochrobactrum anthropi RepID=UPI000288A4B7
Major facilitator transporter {ECO:0000313|EMBL:EXL04800.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
major facilitator transporter
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4517..4825)
|
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000363277A
Uncharacterized membrane protein {ECO:0000313|EMBL:EGF94867.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5187..6224)
|
Sensor protein n=1 Tax=Rhizobium sp. RepID=L0NIP6_RHISP
Chemotaxis protein CheY {ECO:0000313|EMBL:KDP72664.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
two component sensor kinase/response regulator hybrid
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6224..7219)
|
two component sensor kinase/response regulator hybrid (EC:2.7.3.-)
Two component sensor kinase/response regulator hybrid n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0LGP4_AGRSH
Chemotaxis protein CheY {ECO:0000313|EMBL:KDP72664.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7191..8705)
|
non-specific serine/threonine protein kinase (EC:2.7.11.1); K08482 circadian clock protein KaiC
circadian clock protein KaiC n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003751A5D
Circadian clock protein KaiC {ECO:0000313|EMBL:KDP72663.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9182..9412)
|
C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXU0_9RHIZ
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:EYR83938.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
C4-dicarboxylate transport transcriptional regulatory protein
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9409..10506)
|
C4-dicarboxylate transport transcriptional regulatory protein DctD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXU0_9RHIZ
C4-dicarboxylate transport transcriptional regulatory protein DctD {ECO:0000313|EMBL:EYR83938.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
C4-dicarboxylate transport transcriptional regulatory protein DctD
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10503..12344)
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
C4-dicarboxylate transport sensor protein DctB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2G2_9RHIZ
C4-dicarboxylate transport sensor protein DctB
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_12
unknown
|
Not on your lists |
comp(12957..13178)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13589..13882
|
C4-dicarboxylate transport protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTE3_9RHIZ
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
C4-dicarboxylate transporter DctA; K11103 aerobic C4-dicarboxylate transport protein
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_14
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14189..14914)
|
Transcriptional regulator, TetR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GY63_SORC5
Tetracyclin repressor domain-containing protein {ECO:0000313|EMBL:CDN57931.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15010..16872
|
tfdB; 2,4-dichlorophenol 6-monooxygenase (EC:1.14.13.20)
2,4-dichlorophenol 6-monooxygenase {ECO:0000313|EMBL:CAN97191.1}; EC=1.14.13.20 {ECO:0000313|EMBL:CAN97191.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
2,4-dichlorophenol 6-monooxygenase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GY62_SORC5
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_16
unknown
|
Not on your lists |
comp(17002..17310)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_17
Brucella ceti, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17307..19487)
|
Uncharacterized protein n=4 Tax=Brucella RepID=N7NYM5_9RHIZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEH13894.1}; TaxID=595497 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella ceti str. Cudo.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_18
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19587..20246)
|
Transcriptional regulator, TetR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWU9_PARAH
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGT09787.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_19
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20274..21431)
|
acyl-CoA dehydrogenase (EC:1.3.8.3)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGT09786.1}; EC=1.3.8.3 {ECO:0000313|EMBL:AGT09786.1};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Acyl-CoA dehydrogenase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YX41_PARAH
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_20
Brucella pinnipedialis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21443..22231)
|
putative enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
Enoyl-CoA hydratase-like protein n=6 Tax=Brucella RepID=C9U1K3_BRUPB
Enoyl-CoA hydratase {ECO:0000313|EMBL:EEZ29055.1}; TaxID=520462 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella pinnipedialis M292/94/1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_21
Brucella sp. F5/99, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22268..23059)
|
Crotonobetainyl-CoA-hydratase n=5 Tax=Brucella RepID=C9U1K4_BRUPB
Crotonobetainyl-CoA-hydratase {ECO:0000313|EMBL:EEY24708.1}; TaxID=437701 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. F5/99.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_22
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23061..23858)
|
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YE72_PARAH
spermidine/putrescine transport system, permease protein
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09783.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_23
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23868..24794)
|
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWU4_PARAH
spermidine/putrescine transport system, permease protein
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09782.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_24
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24798..25895)
|
spermidine/putrescine transport system, ATP-binding protein (EC:3.6.3.31)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
Spermidine/putrescine transport system, ATP-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YX35_PARAH
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_25
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25970..27001)
|
Spermidine/putrescine transport system, substrate-binding protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y215_PARAH
spermidine/putrescine transport system, substrate-binding protein
Spermidine/putrescine transport system, substrate-binding protein {ECO:0000313|EMBL:AGT09780.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_26
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27202..28752
|
hypothetical protein; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
Thiamine pyrophosphate enzyme domain protein TPP-binding n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WJ79_VEREI
Uncharacterized protein {ECO:0000313|EMBL:KGD89205.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_27
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28817..29410)
|
SAM-dependent methyltransferase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S5J8_RHIET
SAM-dependent methyltransferase protein
SAM-dependent methyltransferase protein {ECO:0000313|EMBL:AGS25205.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_28
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29656..31170
|
Peptidase S10 serine carboxypeptidase n=1 Tax=Rhizobium sp. RepID=L0NKW1_RHISP
Carboxypeptidase {ECO:0000313|EMBL:KGE02073.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
peptidase S10 serine carboxypeptidase
|
|
SCNpilot_expt_1000_bf_scaffold_2130_curated_29
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31213..32457)
|
hypothetical protein; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
FAD dependent oxidoreductase n=1 Tax=Nitratireductor indicus C115 RepID=K2NRJ2_9RHIZ
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKF41990.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
|
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SCNpilot_expt_1000_bf_scaffold_2130_curated_30
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32525..33292)
|
Putative amino acid uptake ABC transporter periplasmic solute-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NVZ5_9RHIZ
Putative amino acid uptake ABC transporter periplasmic solute-binding protein {ECO:0000313|EMBL:EKF41994.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
amino acid uptake ABC transporter substrate-binding protein precursor
|