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SCNpilot_expt_1000_bf_scaffold_2130_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 13589..13882

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate transport protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTE3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 97.0
  • Bit_score: 161
  • Evalue 5.50e-37
C4-dicarboxylate transport protein {ECO:0000256|HAMAP-Rule:MF_01300}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 97.0
  • Bit_score: 161
  • Evalue 7.70e-37
C4-dicarboxylate transporter DctA; K11103 aerobic C4-dicarboxylate transport protein similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 97.0
  • Bit_score: 151
  • Evalue 1.10e-34

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGCTGAGCTCAAAAGGTGCAGCCGGCATCACCGGTGCAGGCTTCATCACCCTTGCTGCGACGCTTTCGGTGGTGCCTTCCGTACCCGTGGCCGGGATGGCGCTCATTCTCGGCATAGATCGCTTCATGTCGGAATGCCGCGCGTTGACCAACTTCATCGGCAACGCCGTCGCGACGATCGTCGTCGCCCGGTGGGAAAACGAGCTTGACGTCGGAAAACTCAATGCAGCACTAAGCGGCGATGGCGCTACCGAAACGTTTGTCGATGCGGCAGTGTTGCAGCCTGGCGAATGA
PROTEIN sequence
Length: 98
MLSSKGAAGITGAGFITLAATLSVVPSVPVAGMALILGIDRFMSECRALTNFIGNAVATIVVARWENELDVGKLNAALSGDGATETFVDAAVLQPGE*