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SCNpilot_expt_1000_bf_scaffold_2130_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(14189..14914)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GY63_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 233.0
  • Bit_score: 237
  • Evalue 1.90e-59
Tetracyclin repressor domain-containing protein {ECO:0000313|EMBL:CDN57931.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.4
  • Coverage: 226.0
  • Bit_score: 300
  • Evalue 2.00e-78
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 233.0
  • Bit_score: 237
  • Evalue 6.10e-60

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Taxonomy

Neorhizobium galegae → Neorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCTGAAGAATGACTCAAGCCCGATATGGGAGCGTCCCGAGCGCCAGCCACGACCTGTTCCGGTGCCTCTCAGCCGGGAGGTCGTCGTTCAGGCGGCCATCGCCCTTGCCGATGCCGAAGGGCTTTCATCGGTGACGCTGCGCAAGGTCGCCGGCGCGCTCGGGGCGGGGCCGATGCGGCTTTATGGCTATATCGCCACGAAGGAAGAGCTGTTCGTGCTCATGGTCGATGCGATCTACGCGGAAATGCTCGAAGGCGAGGATGCGACAGGCGCCTGGCGCGCGCGAATCGCACGGCTGGCCGGCCACCTACGGAGCGCTGCGTTGCGCCATCCCTGGTTCGCCGCGTTGCTGGGCGGCAGGCCACAGCAAGGCCCCAATGCCCTGGCCTTCACCGAAGCCATGTTGTCGGCCGTCGCCGAGGCACCGGGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATAGGCGCCTATGTGGTCGGCGCGGTGTGTGACGAGGCCGCCGACGCCGCGGCAACGCGGGAGAGCGGCCAGACGAAGGCGCAATGGCAGGATGCAAATTGGCCTTACATTCAGCGGGTGATCGCCACCGGCCGTTTCCCGATGCTCTCCAAGGTCGCCCATCAGATGACGCATCCCGCTCCCGGGACGCTCTTTGGCCGTGGGTTGGACCGCGTCCTTGACGGCATTGCCGGAACGACCTCGACTTCACGTTGA
PROTEIN sequence
Length: 242
MLKNDSSPIWERPERQPRPVPVPLSREVVVQAAIALADAEGLSSVTLRKVAGALGAGPMRLYGYIATKEELFVLMVDAIYAEMLEGEDATGAWRARIARLAGHLRSAALRHPWFAALLGGRPQQGPNALAFTEAMLSAVAEAPGIXXXXXXXXXXXXIGAYVVGAVCDEAADAAATRESGQTKAQWQDANWPYIQRVIATGRFPMLSKVAHQMTHPAPGTLFGRGLDRVLDGIAGTTSTSR*