ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2130_curated_23

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(23868..24794)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport system, permease protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XWU4_PARAH similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 291.0
  • Bit_score: 417
  • Evalue 1.30e-113
spermidine/putrescine transport system, permease protein similarity KEGG
DB: KEGG
  • Identity: 71.1
  • Coverage: 291.0
  • Bit_score: 417
  • Evalue 4.20e-114
Spermidine/putrescine transport system, permease protein {ECO:0000313|EMBL:AGT09782.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 291.0
  • Bit_score: 417
  • Evalue 1.90e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paracoccus aminophilus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGTCGCTGCTCCAGACCGCCGCCTCGGATTATCGTCAACCGGCCGCAACGGTGGCGGCGCTGAGGGAGAATGCGCAGGCGCTCGACCGGGATCGACAGCGCGAGAACGGCCAGCTTTTGCGCCTGTCGCTGCCGGCGTTGGCGATCGTCGTCATCCTGATGGTCGCACCGATCGGCTGGCTGTTTTCACTGTCCTTCGTCGGCGCCGATGGCGGCTTCAGTTTCGAAAACTATACGCGCATCGTTACCGACGGCGCCTATGTCTCGATCTTCGCGACCACCTTCCAGGTTGCGGCGGTGGTGACGGTTCTCTGCCTGCTGCTGGGCTATCCGGTCGCCTATGTGCTGACCATCCTGCCGGACCGCTTCGCGCAGGCGTTGATGCTGGCGGTTCTGGTGCCGTTCTGGACGTCGCTTCTGGTGCGCACCTATGCCTGGCTGGTGCTGCTGCAACGGCGCGGTGTCGTCAACGACACACTTTCCATGCTCGGATTGATCGAGCGGCCTCTCCCGCTGGTGCATAACATGGCCGGCGTCACCATCGGCATGGTGCATATCATGCTGCCGTTCCTGATCATGCCGCTCTATGCCTCGATGAAGGCGATCGACGGCAACCTGATGCGGGCGGCCGCCAATCTCGGTTCGTCGCCGGTCCATGCCTTCTTCCGCGTCTTCCTGCCGCTGTCGTTGCCCGGCCTGATCGCCGGCGCGGTTATGGTCTTCGTCATGTGCCTGGGTTTCTACATCACCCCGGCGCTGCTCGGCGGCGGCAAGGTGCAGATGATCGCGCAGCGCATCGAGCAATCGGTGTCGCTGTTTCCGACCTGGGGGCCGGCCGCGGCGCTGGCGGTGGTGCTTCTGGTGCTGACCGGCGGTTTCCTGCTCCTGAGCTGGCTGATAGTTCGCCGGTTTTCGCGCGGCGAGTGA
PROTEIN sequence
Length: 309
MSLLQTAASDYRQPAATVAALRENAQALDRDRQRENGQLLRLSLPALAIVVILMVAPIGWLFSLSFVGADGGFSFENYTRIVTDGAYVSIFATTFQVAAVVTVLCLLLGYPVAYVLTILPDRFAQALMLAVLVPFWTSLLVRTYAWLVLLQRRGVVNDTLSMLGLIERPLPLVHNMAGVTIGMVHIMLPFLIMPLYASMKAIDGNLMRAAANLGSSPVHAFFRVFLPLSLPGLIAGAVMVFVMCLGFYITPALLGGGKVQMIAQRIEQSVSLFPTWGPAAALAVVLLVLTGGFLLLSWLIVRRFSRGE*