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SCNpilot_expt_1000_bf_scaffold_2130_curated_38

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(41976..42851)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J2JFD1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 290.0
  • Bit_score: 490
  • Evalue 1.50e-135
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB98576.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 290.0
  • Bit_score: 490
  • Evalue 2.20e-135
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 290.0
  • Bit_score: 460
  • Evalue 5.40e-127

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGTTTGGCATACCGAGGGCATTCGCGTCGTGGCGCCGGTCAAGTGGCGGCGCTTCGACGGGCTTGTCGGCGTTTTCTGGGAGGCGGAGAGCCAGGCGGGGGCCAAGGGCTATTATCTCGCCGACGACCCGCGCATCATGGTTTTCTTCAGCGACGTCTCCTCGCGCATCCGCATGTCGAATCGCGACGGGGAACTGGCGCAGCATTCGCGACCGATGACCCGCGCGGTCTATGTGCCGGCGGGGATTCCGATGTGGACCACCAGCAAATCCACCCACCGCTTCTCACACCTCAACCTGCATCTGCATCGCGACCGGCTGATGCGCTTCCTGTCGCCCTCGGTCGGGGCCTCGGCGGCGCTGTCGGCGCTGCGCCAGCCGGTGGAAATCCAGGATCTCGGCGCCATCGAGACGCTGGCCGGCCTGCTGGTCGATGAAATCGCCGCGCCGTCGAAACATGTCGTCTACGCCGAAAGCCTCGTCGGCAGCATCGTCACCGGCCTGCTGGACATTCCCGAGGACGACGGCAGGAACGGCAACGGCCGGCTGACCCAGGCGCAGATGAACAGGCTGACGGCGCGCGTCGAAGCCGAGGGCGACTGCCGCCTGACGATTGCCGAGATGGCCGCGACAGTCGGTCTCTCCGAAAGCTGGTTCGCCAATGTCTTCAAGCAGACGACCGGCAGGACGCCGCTGCAATGGCAGCTCGGAAAACGCGTCGACCGGGCAAAGCAGCTCCTGCTGGAAAGCGAGCTGTCGGTGGCCGACATCGCCGTGCAGCTCGGCTTTTCCGATCAGGCGCACCTGACCAAGACATTTCGCCAGATCGCCGGCGATACGCCCGCCGCCTGGCGGCGGATACGGCAATTGCGGTAA
PROTEIN sequence
Length: 292
MVWHTEGIRVVAPVKWRRFDGLVGVFWEAESQAGAKGYYLADDPRIMVFFSDVSSRIRMSNRDGELAQHSRPMTRAVYVPAGIPMWTTSKSTHRFSHLNLHLHRDRLMRFLSPSVGASAALSALRQPVEIQDLGAIETLAGLLVDEIAAPSKHVVYAESLVGSIVTGLLDIPEDDGRNGNGRLTQAQMNRLTARVEAEGDCRLTIAEMAATVGLSESWFANVFKQTTGRTPLQWQLGKRVDRAKQLLLESELSVADIAVQLGFSDQAHLTKTFRQIAGDTPAAWRRIRQLR*