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SCNpilot_expt_1000_bf_scaffold_1744_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(4624..5523)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 295.0
  • Bit_score: 420
  • Evalue 2.20e-114
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 295.0
  • Bit_score: 416
  • Evalue 5.40e-114
tRNA delta(2)-isopentenylpyrophosphate transferase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000382647F similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 295.0
  • Bit_score: 422
  • Evalue 4.10e-115

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Taxonomy

Rhizobium sp. Pop5 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGGAAAACCTTCTCAACCGACAGGACGCGATCCTGATAACCGGCCCGACCGCCAGCGGCAAGTCCGCATTGGCGCTGAAGCTGGCGCGCGAAAGAAACGGCGTGGTCGTCAATGCCGACAGCATGCAGGTCTACGATACGCTGCGGGTGCTGACGGCGCGGCCCTCCGAGGCGGAGATGGAAGGGATACCGCATCTGCTCTATGGCCATGTGCCGGCAGGCGCCGCCTATTCGACCGGGGCGTGGCTGCGCGACGTCACCGAATTGCTGCCGCGTCTCAAAGCTGAAGGAAAACTGCCGGTCTTCGTTGGCGGCACCGGGTTGTATTTCAAGGCGCTGACCGGCGGGCTCTCGGAAATGCCTGGGGTCGACGTGGCCATTCGCGAAGGCTGGCGCGGGCGGCTGGCCGCGGAAGGGCCGGAGCGGCTGCATGACCTGCTTGCGGCGCGCGATGGCGCCGCCGCCGCGCAGCTCAATCGGCAGGATGGCCAGCGTATCGTGCGGGCGCTGGAAATTCTCGACGCCACCGGCCGGTCGATCACCGATTTCCAGAACCGCACCGGCCCGCTTGTCATCGATCCGGAGAGAGCAGAAAAATATGTCGTGTTGCCGGAGCGCAGCCTGTTGCATGGCCGCATCGGCCGCCGCTTCGAGCAGATGCTGGACTCCGGCGCGGTGGAGGAAGTGCAGGCGCTGCTGGCCCAAGAACTTTCGCCGCAGATGCCGGTGATGAAGGCCATCGGCGTATCGCAGATTGTCGCCATGCTTTCAGGAGAGCTGGATGCAGAGCGCGTGCGCGAACAGGGCGCGGCCGCGACACGGCAATATGCCAAGCGGCAGATGACCTGGTTTCGCAACCAGATGGACGAAAGCTGGGTGCGGCTCGACGGGGCCGGTTAA
PROTEIN sequence
Length: 300
MENLLNRQDAILITGPTASGKSALALKLARERNGVVVNADSMQVYDTLRVLTARPSEAEMEGIPHLLYGHVPAGAAYSTGAWLRDVTELLPRLKAEGKLPVFVGGTGLYFKALTGGLSEMPGVDVAIREGWRGRLAAEGPERLHDLLAARDGAAAAQLNRQDGQRIVRALEILDATGRSITDFQNRTGPLVIDPERAEKYVVLPERSLLHGRIGRRFEQMLDSGAVEEVQALLAQELSPQMPVMKAIGVSQIVAMLSGELDAERVREQGAAATRQYAKRQMTWFRNQMDESWVRLDGAG*