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SCNpilot_expt_1000_bf_scaffold_2223_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(11633..12742)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type amino acid transport system permease component-like protein n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2ARH2_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 356.0
  • Bit_score: 330
  • Evalue 2.00e-87
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 48.9
  • Coverage: 356.0
  • Bit_score: 330
  • Evalue 6.20e-88
ABC-type amino acid transport system permease component-like protein {ECO:0000313|EMBL:ACZ90312.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 356.0
  • Bit_score: 330
  • Evalue 2.80e-87

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Taxonomy

Streptosporangium roseum → Streptosporangium → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGACGATGGCAAAGACCATGGACGATCCGGTCCCGGCAGGGGCGGCTGCCGGGGCAACCCGCCAGACCACGCCCTTGCCGACCGGCTGGCCCGTCGCCACGGCCGCCGCGCTTGCGGCGGTCGCGGTCGGCATCGCGATGCTTGCCGGCGGCAATGTCGCCGCGCTGGCCGGTGCGGAGTTCCGGCCGCTTGGCGCAGGATTGGCGGCGCTCTGCATCGCCCTCGTGCTCTCCGTGCCCATCGGCCGGGCGCTGCGCAGCCATGCCCGCTCGGCAGAAGCCTGGGGCGGCGGCGATTACGTCGCGGCGCGCGAGCAGGCGGCGCATGCGCGCCACCATGCCTTCACGGCAATGGGCATCAGCGGCTTCCTGCTGCCGGTGCTTGCCATCGCCACCTTCCTCACCATCAACGATGCGGTGGTCTACAAGACCTTTTTGCGCGGCGATGTCATTCTCGCCAGCCTGGTCGATGTCACCAAGGCTTTCGGCACCAACCTGTCCATCGCGATTGCGGCGCAACTGCTGTCGATGCTGTTCGGGCTGATGCTGGCCATCGGCCGCTCGCTGCAGGGGTCGAGCTTCACGCTGGTGCGCGGCGTGTGCATCTTCTATGTCGATATTTTCCGCAGCCTGCCGGCCATCGTCATCATCTATCTCGTCTGCTTCGGCGTGCCGCTGATGGGCATTCCGGTGATCAGCGGTGGCCAGCCGATGCTCTATGCCATCGTGGCGCTGTCGCTGACCTATGCCGCCTATAATGGCGAGCAGTTCCGCGCCGGCCTGCAGGGCATTCACCGCAGCCAGATTTCCGCCGCCCAGTCGCTCGGCATTCCGCCGGGCGCGGTGCTGCGCCTCATCGTGCTGCCGCAGGCCATGCGCCGCATCGCCGGGCCGATGCTCGGCAATTTCATCGCGCTGCAGAAGGACACGGCGCTGGTCAACATCGTCGGTATCGTCGATGCCTTCACCCAGGCGAAGATCTATTCGGCCAATTACTACAATCTCTCGTCGGTGACCGTTGTCTGCATCCTGTTCATCGCCGTCACCATTCCTCAGACCCGGCTGGTCGATTATCTCGTCTCCCGCGCCGACAGCAAGGAGGGCCGCTGA
PROTEIN sequence
Length: 370
MTMAKTMDDPVPAGAAAGATRQTTPLPTGWPVATAAALAAVAVGIAMLAGGNVAALAGAEFRPLGAGLAALCIALVLSVPIGRALRSHARSAEAWGGGDYVAAREQAAHARHHAFTAMGISGFLLPVLAIATFLTINDAVVYKTFLRGDVILASLVDVTKAFGTNLSIAIAAQLLSMLFGLMLAIGRSLQGSSFTLVRGVCIFYVDIFRSLPAIVIIYLVCFGVPLMGIPVISGGQPMLYAIVALSLTYAAYNGEQFRAGLQGIHRSQISAAQSLGIPPGAVLRLIVLPQAMRRIAGPMLGNFIALQKDTALVNIVGIVDAFTQAKIYSANYYNLSSVTVVCILFIAVTIPQTRLVDYLVSRADSKEGR*