ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2837_curated_25

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 21368..22468

Top 3 Functional Annotations

Value Algorithm Source
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.3
  • Coverage: 366.0
  • Bit_score: 675
  • Evalue 4.60e-191
nspC; carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-] similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 364.0
  • Bit_score: 633
  • Evalue 5.80e-179
Carboxynorspermidine/carboxyspermidine decarboxylase n=1 Tax=Rhizobium sp. RepID=L0NI20_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 365.0
  • Bit_score: 668
  • Evalue 5.20e-189

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGTCTTTGACGACCCCCTATTATCTGATCGACAAATCCAGGCTGCTGCAGAACATGGAAAAGATCGCGCTGCTGCGCGAGCTTTCCGGCGCCAAGGCCCTGCTGGCGCTGAAATGCTTCGCCACCTGGTCGGTCTTCGATTTCATGCGCGACTACATGGACGGCACCACCTCCTCCTCGCTCAACGAAGTGCGTCTCGGCCATGAGCGGTTCGGCAAGGAAACCCACGCCTATTCCGTGGCTTACGCCGATTACGAGATCGACGAGGTCGTCTCCCACGCCGACAAGATCATCTTCAACTCGATCAGCCAGCTGGAGCGCTTTTCCGACAAATCTGCCGGAATCGTCCGTGGCCTGCGTCTCAATCCGCAGATCAGCTCCTCCAGCTTCGATCTCGCCGATCCGGCCCGCCCCTTCTCGCGCCTGGGCGAATGGGATGTGAACAAGGTCGAGAAAGTCATGGACCGCGTCTCCGGCTTCATGATCCACAACAATTGCGAAAACAGCGATTTCAGCCTGTTCGACCGCATGCTTGCGACCATCGAGGAGCGCTTCGCGCCGCTTCTGAAGAAGGCGGAATGGGTCAGCCTTGGCGGCGGCATCCACTTCACCGGCGAAAACTATCCGCTGGAACAGTTCGCCGAGCGCCTGAAGCGTTTTGCCGGCGAATACGGCGTGCAGGTCTATCTGGAGCCGGGCGAGGCCTCGATCACCAAGTCCACGACGCTGGAAGTGACCGTGCTCGATACGCTCTTTAACGGCAAGAACCTCGCCGTGGTCGACAGCTCCATCGAAGCCCACATGCTCGACCTGCTGATCTACCGCGAGAACGCCAAGCTTTCGCCGAACACCGGCGATCATCGATACATGGTCTGTGGCAAGTCCTGCCTCGCCGGCGATATTTTTGGGGAATTCAATTTCGAGCATGAGCTGAAGGTCGGCGACTGCATCTCCATCCAGGATGCCGCCGGCTACACCATGGTCAAGAAAAACTGGTTCAACGGCGTGAAAATGCCGGCCATCGCCATCCGCGAGCTGGATGGCAGCATTCGAACGGTCCGCGAGTTTGCCTATGCGGACTATGAACAGAGCCTTTCCTGA
PROTEIN sequence
Length: 367
MSLTTPYYLIDKSRLLQNMEKIALLRELSGAKALLALKCFATWSVFDFMRDYMDGTTSSSLNEVRLGHERFGKETHAYSVAYADYEIDEVVSHADKIIFNSISQLERFSDKSAGIVRGLRLNPQISSSSFDLADPARPFSRLGEWDVNKVEKVMDRVSGFMIHNNCENSDFSLFDRMLATIEERFAPLLKKAEWVSLGGGIHFTGENYPLEQFAERLKRFAGEYGVQVYLEPGEASITKSTTLEVTVLDTLFNGKNLAVVDSSIEAHMLDLLIYRENAKLSPNTGDHRYMVCGKSCLAGDIFGEFNFEHELKVGDCISIQDAAGYTMVKKNWFNGVKMPAIAIRELDGSIRTVREFAYADYEQSLS*