name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_2837_curated_1
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(119..550)
|
Transcriptional regulator AsnC family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JZ82_AGRVS
transcriptional regulator AsnC family
Transcriptional regulator AsnC family {ECO:0000313|EMBL:ACM37327.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_2
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
675..1802
|
Saccharopine dehydrogenase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F9T4_9RHIZ
Saccharopine dehydrogenase {ECO:0000313|EMBL:KEA04421.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
dehydrogenase
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_3
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2021..2275
|
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003821ADB
Uncharacterized protein {ECO:0000313|EMBL:KEC80808.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2298..2597
|
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6W7_9RHIZ
Transporter {ECO:0000313|EMBL:KGD95025.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2627..2869
|
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2B4H8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ30925.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_6
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2910..3623)
|
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MLT6_9RHIZ
Aldehyde dehydrogenase {ECO:0000313|EMBL:EKF18177.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_7
unknown
|
Not on your lists |
3767..4414
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_8
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4963..6318
|
Sensory methylation accepting chemotaxis protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JYA0_AGRVS
sensory methylation accepting chemotaxis protein
Sensory methylation accepting chemotaxis protein {ECO:0000313|EMBL:ACM37130.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_9
Aquamicrobium defluvii, Aquamicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6421..6816)
|
GreA/GreB family elongation factor n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11G81_MESSB
Transcription elongation factor {ECO:0000313|EMBL:EXL09325.1}; TaxID=69279 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Aquamicrobium.;" source="Aquamicrobium defluvii.;"
nucleoside diphosphate kinase regulator; K06140 regulator of nucleoside diphosphate kinase
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_10
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7163..8338)
|
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BD216
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EKF18180.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
extracellular ligand-binding receptor
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_11
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8580..9449)
|
LysR family transcriptional regulator n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MLT1_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF18172.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_12
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9596..10750
|
monooxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368934F
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:EKF18173.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
monooxygenase FAD-binding
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_13
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10780..11568
|
dioxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003817750
putative dioxygenase
Putative dioxygenase {ECO:0000313|EMBL:ABS17092.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_14
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12121..12453
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364FF2F
Alpha/beta hydrolase domain-containing protein {ECO:0000313|EMBL:EKF18175.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_15
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12638..13549)
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378D273
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF18176.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
LysR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_16
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13806..14759
|
dihydrodipicolinate synthase; K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthetase n=1 Tax=Hoeflea sp. 108 RepID=UPI000361C762
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EKF18178.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_17
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14808..15353
|
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
3-hydroxyanthranilate 3,4-dioxygenase (EC:1.13.11.6); K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
3-hydroxyanthranilate 3,4-dioxygenase n=1 Tax=Hoeflea sp. 108 RepID=UPI0003828848
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_18
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15470..16633
|
ABC transporter substrate-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036076F2
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKF18171.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter ATP-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_19
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16712..17626
|
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00037154AB
Inner-membrane translocator {ECO:0000313|EMBL:EKF18170.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_20
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17725..18666
|
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI0003708537
Inner-membrane translocator {ECO:0000313|EMBL:EKF18169.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
Inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_21
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18663..19418
|
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F76C7
ABC transporter {ECO:0000313|EMBL:EKF18168.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_22
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19412..20113
|
ABC transporter ATP-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003698834
amino acid ABC transporter ATPase; K01996 branched-chain amino acid transport system ATP-binding protein
ABC-type amino acid transport system, ATPase component protein {ECO:0000313|EMBL:ADZ70296.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_23
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20100..20927
|
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E5E56
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_24
unknown
|
Not on your lists |
21054..21230
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21368..22468
|
Carboxynorspermidine/carboxyspermidine decarboxylase {ECO:0000256|PIRNR:PIRNR038941}; Short=CANS DC/CAS DC {ECO:0000256|PIRNR:PIRNR038941};; Short=CANSDC/CASDC {ECO:0000256|PIRNR:PIRNR038941};; EC=4.1.1.96 {ECO:0000256|PIRNR:PIRNR038941};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nspC; carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase [EC:4.1.1.-]
Carboxynorspermidine/carboxyspermidine decarboxylase n=1 Tax=Rhizobium sp. RepID=L0NI20_RHISP
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_26
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22502..23740
|
Saccharopine dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CS54_9RHIZ
Saccharopine dehydrogenase {ECO:0000313|EMBL:EYR81633.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_27
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23798..25000)
|
Flavoprotein, HI0933 family/uncharacterized flavoprotein, PP_4765 family n=1 Tax=Rhizobium sp. CF080 RepID=J2SP88_9RHIZ
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:KEQ04384.1}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
hypothetical protein; K07007
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25106..25300)
|
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WCY4_RHILT
Uncharacterized protein {ECO:0000313|EMBL:AHF88447.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25366..25599)
|
30S ribosomal protein S21 n=2 Tax=Rhizobium etli RepID=Q2K1Q4_RHIEC
rpsU-3; 30S ribosomal protein S21 3
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
|
|
SCNpilot_expt_1000_bf_scaffold_2837_curated_30
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25997..26755)
|
Glutaredoxin-like protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2H9R2_9RHOB
Glutaredoxin-like protein {ECO:0000313|EMBL:AKI03506.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
glutaredoxin
|