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SCNpilot_expt_1000_bf_scaffold_20011_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3..344)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F390_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 2.90e-45
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:EHS52800.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 114.0
  • Bit_score: 188
  • Evalue 4.00e-45
nocM; opine ABC transporter permease; K10019 octopine/nopaline transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 114.0
  • Bit_score: 138
  • Evalue 1.10e-30

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAACTGGTATCTCATTGTTGAGGCCCTGCCGTTGCTCCTCGAGGGGGCTCTCCTCACGGTCAAGTTGACTGCGACGTCCCTTGTGCTTGGACTTTTCATCGCATTGCCGCTTGCACTGCTGAGGGCATCACCTTCCCGGGCGCTCTCCCGTCCCATTCTTTTGTACACGTTCGTGTTGCGCGGAACCCCGCTTCTTGTCCAGCTCTTCCTGATCTATTACGGTGCAAGCCAGGTCGAGTGGGTTCGCTCAAGCATCCTCTGGAGTATCTTGAGGGAGCCATATTGGTGCGCCCTCATCGCCTTCTCATTGAACAATGCCGCATACACGACGGAAATCCTC
PROTEIN sequence
Length: 114
MNWYLIVEALPLLLEGALLTVKLTATSLVLGLFIALPLALLRASPSRALSRPILLYTFVLRGTPLLVQLFLIYYGASQVEWVRSSILWSILREPYWCALIAFSLNNAAYTTEIL