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SCNpilot_expt_1000_bf_scaffold_20011_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(355..1032)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F389_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 225.0
  • Bit_score: 358
  • Evalue 7.10e-96
Amino acid ABC transporter membrane protein 1, PAAT family {ECO:0000313|EMBL:EYR82831.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 225.0
  • Bit_score: 371
  • Evalue 8.70e-100
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 227.0
  • Bit_score: 252
  • Evalue 1.70e-64

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
ATGATCGACTTGCAGGGCTTTGGTGACCAAATTGCCGTCGGCGCAATGACAACGTTCCGGATTGCAATGGCCAGCTTGGTGCTTGGGATCGGCGTCGGCCTTTTGGGGGCAACGGCAAAGCTTAGCCAGTTCCAGGTGCTGCGGCGGCTGGCGAATGCCTATACGACGATCATTCGCGGCGTTCCCGAACTTCTCATCATACTTATCCTCTACTTCGGCGGCACGGTCGCCTTGACGGCGCTTTTCGGTCGTTACGTAGAGGTTGATGCGTTCGCGGCGGGCGTTTTTTCGCTGACCATTGTCTTCGGCGCATATGCAGCCGAGGTGTTCCGAGCTGCAATTCAAGCTGTGCCCACCGGCCAGATCGAGGCCGCTCAAGCTCTCGGGCTGTCCAAGGCGCTCACTTGGCGCCTTGTTGTCGTGCCGCAGATGTGGCGATACGCGCTGCCCGGACTTGGAAATCTTTGGCTCACATTGCTGAAGGACACGGCCCTCGTTTCCGTGGTCGGCCTGGAAGACGTGATGCGAAAGACCGGCGTAGCCGCCGGTTCAACCCACACCCCCCTGACCTTCTATTCCATCGCCGCCAGCATCTATCTCTCCTTCACGTCGATCTCCCTGGTGTGCCTCACCCTTCTTGAGCGGCGCGCCAACCGCGGCGTCCGCATCGCAGAATGA
PROTEIN sequence
Length: 226
MIDLQGFGDQIAVGAMTTFRIAMASLVLGIGVGLLGATAKLSQFQVLRRLANAYTTIIRGVPELLIILILYFGGTVALTALFGRYVEVDAFAAGVFSLTIVFGAYAAEVFRAAIQAVPTGQIEAAQALGLSKALTWRLVVVPQMWRYALPGLGNLWLTLLKDTALVSVVGLEDVMRKTGVAAGSTHTPLTFYSIAASIYLSFTSISLVCLTLLERRANRGVRIAE*