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SCNpilot_expt_1000_bf_scaffold_20011_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1029..1583)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F388_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 184.0
  • Bit_score: 303
  • Evalue 1.70e-79
ABC transporter related protein {ECO:0000313|EMBL:EHS52798.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 184.0
  • Bit_score: 303
  • Evalue 2.40e-79
occP-2; octopine ABC transporter ATP-binding protein OccP 2 similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 181.0
  • Bit_score: 245
  • Evalue 1.00e-62

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
TTGCGTGATGGCCGGACGGGGCAGCGCGAAATCAATGCACTGCGCATGAAGCTCGGCATGGTGTTCCAAAGCTTCAACCTCTGGTCTCACAAGACCGTCCTCGAAAACATTGTTGAGGCGCCGATACACGTCATAGGGCTTCCAAAACGGGAGGCATGCCTCCGCGCTGAGGAGTTGCTGCTGAAGGTTGGCTTGGCCGACAAGCGCCACGTGTATCCCTGCCATCTCTCCGGTGGGCAGCAACAACGGGTTGCAATCGCGCGGGCGCTTGCAATGGAACCCGAGATCCTTCTTTTCGACGAGCCGACATCCGCTCTCGATCCGGAATTGGTCGGCGAGGTGTTGAAAGTCATTCGCTCGCTTGCGGGCGAGGGGAGGACGATGCTCATCGTTACCCACGAACTCGGTTTCGCCCGGCAAGTGTCGAACCGCGTCGTCTTCCTCCACCGGGGGCAGATCGAAGAAGAGAACGAACCCGGCGCATTCTTTGGCAATCCAACGTCACCTCGCCTCAAGGAATTCCTCTCGGCGCAAAGCGGGGAGGCCCGCCGATGA
PROTEIN sequence
Length: 185
LRDGRTGQREINALRMKLGMVFQSFNLWSHKTVLENIVEAPIHVIGLPKREACLRAEELLLKVGLADKRHVYPCHLSGGQQQRVAIARALAMEPEILLFDEPTSALDPELVGEVLKVIRSLAGEGRTMLIVTHELGFARQVSNRVVFLHRGQIEEENEPGAFFGNPTSPRLKEFLSAQSGEARR*