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SCNpilot_expt_1000_bf_scaffold_6626_curated_7

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(5519..6394)

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein (Fragment) n=1 Tax=Rhizobium sp. CF080 RepID=J2RWQ4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 292.0
  • Bit_score: 338
  • Evalue 5.70e-90
Uncharacterized protein {ECO:0000313|EMBL:EUB95945.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 292.0
  • Bit_score: 338
  • Evalue 8.10e-90
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 288.0
  • Bit_score: 329
  • Evalue 8.40e-88

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGATCGGCGGGCTGGCATTGTCGCGCGACCGCTGGTTCTGGGCGGTATTGTCGGCCTTCCTCGTCTTCACCAACACCAATTCGCGCGGCGATACCGCCATCAAGGCGATGCAGCGTTCCGGCGGCACGCTGATCGGCATCGTCTGCGGCATGGGGCTCTCGGCGTTGCTGAGCGGTTTTCCGTGGCTCGCCGGCGCGGTCGCCATCCTCGCGGTCTTCCTCGCCTTCTTCAGCCTGCAGGCCTCCTATACGGCGATGACCTTTTTCATATCGATCGTCATCTGCATCGTCTATGGCCTGACGGGAACGCTGACGCTCGACCTGTTGCGCCTCCGGCTGGAGGAAACGGTCATCGGCGCGGTGGCAGGCATGGCCGTCGCCTTCTTCGTGCTGCCGACCCGCACCCAGACGACACTCGGCGATGCCCTCGCAAAATGGTTCGATGCCGCGCAACGCCTGTTGGAAGCGGCGGCGGACGAGAAAAACGGCGCCGAACTCATCACGCTCTCGAAGGCGCTCGACGCCGCCTATCGCGACGTCACCCAGGCGGCGCGGCCGCTCGGCGTCTCCTGGCAACTGGTGACGCGGCCCGGCCATATCCGCCAGACGCTCGCCATCATGATGGCCGCAACCTACTGGTCGCGCATCTTCGCCCGCCGCGTCGCCTTTGCCCGCGCCGCCGAAATGGACGCCATCCGCCCGGCCATCCGCGATGCGTTGACCGGGCTGGAACGGGTACGGGCCAAGGGAACGGGCATCTTTTTCGTCAATCGCAAGCCGCCGCAACTGCAATCGCGGCATCTGCCGATCGTCCATGACGGCTCCCGCCTCGGCATCGAAATGATCGCCGCGACCCTCGACAGGCTTTATCCATAG
PROTEIN sequence
Length: 292
MIGGLALSRDRWFWAVLSAFLVFTNTNSRGDTAIKAMQRSGGTLIGIVCGMGLSALLSGFPWLAGAVAILAVFLAFFSLQASYTAMTFFISIVICIVYGLTGTLTLDLLRLRLEETVIGAVAGMAVAFFVLPTRTQTTLGDALAKWFDAAQRLLEAAADEKNGAELITLSKALDAAYRDVTQAARPLGVSWQLVTRPGHIRQTLAIMMAATYWSRIFARRVAFARAAEMDAIRPAIRDALTGLERVRAKGTGIFFVNRKPPQLQSRHLPIVHDGSRLGIEMIAATLDRLYP*