ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6626_curated_10

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 8300..9514

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 404.0
  • Bit_score: 794
  • Evalue 9.70e-227
Isocitrate dehydrogenase [NADP] n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKX7_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 404.0
  • Bit_score: 794
  • Evalue 6.90e-227
isocitrate dehydrogenase, NADP-dependent similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 404.0
  • Bit_score: 794
  • Evalue 2.20e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCAAAAGATCAAGGTTGCAAATCCGGTCGTCGATCTCGACGGCGACGAGATGACCCGTATCATCTGGCAGTTCATCAAGGACAAGCTGATCCTGCCCTATCTGGACCTCGACATCGATTATTACGACCTGTCGGTCCAGAACCGCGACGCGACCAACGATCAGGTGACCGTCGATGCCGCCAACGCCATCAAGAAGCATGGCGTCGGCATCAAGTGCGCGACGATCACCCCGGACGAAGACCGTGTCAAGGAATTCGGCCTGAAGGAAATGTGGAAGAGCCCGAACGGCACGATCCGCAACATCCTCGGCGGCGTCATCTTCCGCGAGCCGATCATCTGCAAGAACGTTCCGCGCCTGGTTCCCGGCTGGACCAAGCCGATCGTCGTCGGCCGCCATGCCTTCGGCGACCAGTATCGCGCCACCGACTTCCGCTTCCCCGGCAAGGGCAAGTTGACGATCAAATTCGTCGGCGAAGACGGTCAGGTCATCGAGAAGGACGTCTTCAACGCGCCGGGTTCGGGCGTCGCCATGGCGATGTACAACCTCGACGAATCGATCCGCGAATTCGCCCGCGCCTCGATGATGTACGGCCTGATGCGCAAATGGCCGGTCTACCTGTCGACCAAGAACACCATCCTGAAAGCCTATGACGGTCGCTTCAAGGATATCTTTGAGGAAGTCTACCAGACCGAATTCAAGGCGCAGTTCGACGAAGCCGGCATCACCTACGAACACCGCCTGATCGACGACATGGTCGCCTCGGCGCTGAAGTGGTCCGGCGGTTACGTCTGGGCCTGCAAGAACTATGACGGCGACGTGCAGTCCGACACCGTGGCTCAAGGCTTCGGCTCGCTCGGCCTGATGACCTCGGTTCTGGTGACGCCGGATGGCAAGACGGTCGAAGCGGAAGCTGCCCACGGCACGGTGACGCGCCACTATCGCCAGCACCAGAAGGGCCAGGAAACCTCGACCAACTCGATCGCCTCGATCTTCGCCTGGACGCGCGGTCTCGCGCATCGCGCCAAGCTGGACGACAATGCCGATCTCGCCAGGTTCGCCTCGACGCTGGAACGGGTCTGCGTCGAAACCGTCGAATCCGGCTTCATGACCAAGGATCTGGCGCTGCTGATCGGTCCCGACCAGCCGTGGCTGTCGACCACCGCCTTCCTCGACAAGATCGACGAAAACCTCAGGAAAGCCATGGCCGCTTAA
PROTEIN sequence
Length: 405
MQKIKVANPVVDLDGDEMTRIIWQFIKDKLILPYLDLDIDYYDLSVQNRDATNDQVTVDAANAIKKHGVGIKCATITPDEDRVKEFGLKEMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIVVGRHAFGDQYRATDFRFPGKGKLTIKFVGEDGQVIEKDVFNAPGSGVAMAMYNLDESIREFARASMMYGLMRKWPVYLSTKNTILKAYDGRFKDIFEEVYQTEFKAQFDEAGITYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDTVAQGFGSLGLMTSVLVTPDGKTVEAEAAHGTVTRHYRQHQKGQETSTNSIASIFAWTRGLAHRAKLDDNADLARFASTLERVCVETVESGFMTKDLALLIGPDQPWLSTTAFLDKIDENLRKAMAA*