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SCNpilot_expt_1000_bf_scaffold_6335_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(35..724)

Top 3 Functional Annotations

Value Algorithm Source
Beta-etherase LigE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ERS9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 229.0
  • Bit_score: 391
  • Evalue 5.90e-106
Beta-etherase LigE {ECO:0000313|EMBL:EYR78789.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 229.0
  • Bit_score: 391
  • Evalue 8.20e-106
putative lignin beta-ether hydrolase similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 229.0
  • Bit_score: 304
  • Evalue 3.00e-80

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGACCCGACTGCTCTATGCGCTCGCCGGCGCCGACAGGGACCGGCAGTTTTCGCCCCACGTCTGGAAGACGGTGATGTCGCTTGCCCATAAGGGCCTCGACTACGAGACCGTGCCGGTGGGCTTCACGGAGATCGCGGGCATCGAGGACGGCAGCGCGGCGACGGTGCCGGTGCTGCGCGACGGCGACCTCCTGGTGCGCGACAGTTTCGACATCGCGGTCTATCTCGACGAGGCCTATCCCGACCGGCCGACGCTGTTCGGCGGGCAGGGCGGCAGGGCGATGGCCCGCTTCATCGAGAGCTGGTCGCAGTCGGCGCTGCACATGGCCGTGACGCGCATCGCGATCCTCCACATCCACGACCTGCTCGGCCCGGCCGACCGGGCCTATTTCCGCCGCAGTCGCGAGGCGCGGCTCGGCGCCTCGCTGGAAGACATCGCGGCGGCCGGCGCGGCGGAGGGCGCGGGCTTTGCCAAGAGGCTCCAGCCTCTGCGCAGCATGCTGAAGGCGCAGCCCTTCATCGGCGGCGAAGGGCCGCTCTTTGCCGACTACATCGTCTTCGGCGCGCTGCAATGGCTGCGCACGACGGCCGGAACGAAGGTGCTGGACGACGACGATCCGGTCGCCCTCTGGTTCCGCCGCTGCCTCGACCTCCACGGCGGCGTCGGCCAGCGTGTGACGGCGGCATGA
PROTEIN sequence
Length: 230
MTRLLYALAGADRDRQFSPHVWKTVMSLAHKGLDYETVPVGFTEIAGIEDGSAATVPVLRDGDLLVRDSFDIAVYLDEAYPDRPTLFGGQGGRAMARFIESWSQSALHMAVTRIAILHIHDLLGPADRAYFRRSREARLGASLEDIAAAGAAEGAGFAKRLQPLRSMLKAQPFIGGEGPLFADYIVFGALQWLRTTAGTKVLDDDDPVALWFRRCLDLHGGVGQRVTAA*