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SCNpilot_expt_1000_bf_scaffold_1502_curated_4

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 2201..3088

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LM47_RALME similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 290.0
  • Bit_score: 242
  • Evalue 4.30e-61
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 290.0
  • Bit_score: 242
  • Evalue 1.40e-61
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF08779.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 290.0
  • Bit_score: 242
  • Evalue 6.10e-61

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Taxonomy

Cupriavidus metallidurans → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGATCTGAGACAAATCCGATATTTCGTGGCCGTGGCCGAGGAGGAGCATTTCGGCCGCGCCTCCGAGCGTATCCGCATCGCCCAGCCGGCGCTCAGCCGGCAGATCCAGTTGCTGGAGGCCGAACTCGGGGTGACCCTGTTCGACCGGCTGCCGCGTGGGGTGAAGCTTTCCGTCGCCGGCCGGACCTTTCTCGCGCATTGCAGTCAAATCATGGCCGACCTCGGCCATGCGGTCAGCGAAACGCAAGCCGTGGCGCGGGGCGAAGTGGGCGTTCTCAAGCTCGGCTTCATCGAGGTCGCGGCCTGGAACGGCGTCATCCCGGCGACGATCATGGCCTTCCGGGACGGTTATCCCGGCGTTCGCCTGGTCCTGAACAGCCTGAGCGGACTGGAGCAACTCGAAGGCATCCATGATGGCCGGATCGATGCGGGCTTCCTCTACAATCCGCCGCCGGATCCGCTTCTCGCCATCCGCCCGGTCGCGCGCCACACCGTGCTTCTGGCGGTGCCGAAGGACTCGGCGCTTTCCGGACGGGCGTCGGTCGACGTTCGCGAACTGGTCGATCAGCCCGTCATTTCGTTTCACCGACGCGAAAGCCCTGTCTATCACGACGAATTGCATCGCGGCCTGTTCCAGGCGGGGGTGGCGGTCGATGTGGTGCACGAAGCGATCAACGAGGCGGAAATGCTGGCGCTGGTGACCACCGGCATGGGCGTCGCCCTTGTCAACGAATGCCAGAAATGGCGCCCGCCGCATGGCATCATCCTCGTTCGCGTCGACAATCTCGATGTCGGCCTGGATCTGGCTTTGGTCTACCGGCGCGACCACACCGTCCCGGCTCTGGCCCGTTTCCTCGCCCTGCTTCCCGATCAGACGTCCTTCTGA
PROTEIN sequence
Length: 296
MDLRQIRYFVAVAEEEHFGRASERIRIAQPALSRQIQLLEAELGVTLFDRLPRGVKLSVAGRTFLAHCSQIMADLGHAVSETQAVARGEVGVLKLGFIEVAAWNGVIPATIMAFRDGYPGVRLVLNSLSGLEQLEGIHDGRIDAGFLYNPPPDPLLAIRPVARHTVLLAVPKDSALSGRASVDVRELVDQPVISFHRRESPVYHDELHRGLFQAGVAVDVVHEAINEAEMLALVTTGMGVALVNECQKWRPPHGIILVRVDNLDVGLDLALVYRRDHTVPALARFLALLPDQTSF*