name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_1502_curated_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..435)
|
Acetyl-CoA acetyltransferase n=1 Tax=Rhizobium sp. CF080 RepID=J2T045_9RHIZ
Thiolase {ECO:0000313|EMBL:CDN56132.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_2
unknown
|
Not on your lists |
603..1316
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_3
unknown
|
Not on your lists |
1306..1524
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_4
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2201..3088
|
Transcriptional regulator, LysR family n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LM47_RALME
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABF08779.1}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_5
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3269..4780
|
Probable aldehyde dehydrogenase n=1 Tax=Sagittula stellata E-37 RepID=A3K7U6_9RHOB
Probable aldehyde dehydrogenase {ECO:0000313|EMBL:EBA06718.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_6
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4802..5287)
|
Transcriptional regulator, MarR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LLB9_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KGF69430.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
MarR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_7
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5274..5792)
|
Transcriptional regulator, MarR family protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7T9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF69431.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_8
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5831..6319)
|
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LLB7_RUEPO
Uncharacterized protein {ECO:0000313|EMBL:KIC21441.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp. ANG-Vp.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_9
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6316..7881)
|
Indolepyruvate oxidoreductase subunit B {ECO:0000313|EMBL:KGF69432.1}; EC=1.2.7.8 {ECO:0000313|EMBL:KGF69432.1};; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
indolepyruvate oxidoreductase subunit B (EC:1.2.7.8); K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
Indolepyruvate ferredoxin oxidoreductase n=1 Tax=Sagittula stellata E-37 RepID=A3K7T7_9RHOB
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_10
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7883..10036)
|
indolepyruvate oxidoreductase, IorA subunit; K00179 indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
Indolepyruvate oxidoreductase, IorA subunit, putative n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LLB5_RUEPO
Indolepyruvate ferredoxin oxidoreductase {ECO:0000313|EMBL:KGF69433.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_11
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10171..10791)
|
Uncharacterized protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7U5_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EBA06717.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_12
unknown
|
Not on your lists |
comp(11429..12397)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_13
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13079..14095
|
ABC transporter, permease protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7U3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KGF69416.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_14
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14092..14949
|
ABC transporter, permease protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7U2_9RHOB
ABC transporter permease {ECO:0000313|EMBL:KGF69417.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
binding-protein-dependent transport systems inner membrane component
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_15
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14953..16794
|
Putative ABC transporter ATP-binding protein n=1 Tax=Sagittula stellata E-37 RepID=A3K7U1_9RHOB
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:EBA06713.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagittula stellata E-37.;"
oligopeptide/dipeptide ABC transporter ATPase
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17002..17895)
|
Stage II sporulation protein E n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUK9_9RHIZ
Stage II sporulation protein E {ECO:0000313|EMBL:EYR84004.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
protein serine/threonine phosphatase
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18123..18647
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ65_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84003.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_18
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18641..19816
|
ubiE2; ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC:2.1.1.-)
Putative methyltransferase protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NU86_9RHOB
Putative methyltransferase protein {ECO:0000313|EMBL:EAV43488.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_19
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19813..22194
|
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NU87_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV43489.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
sigB; sigma factor SigB regulation protein rsbU
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_20
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22197..22745
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES48_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR84000.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_21
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22787..23125
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUL4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83999.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_22
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23095..23892)
|
Protein kinase domain-containing protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ69_9RHIZ
Protein kinase domain-containing protein {ECO:0000313|EMBL:EYR83998.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
serine/threonine protein kinase
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23908..25437)
|
Methylase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ40_9RHIZ
Methylase {ECO:0000313|EMBL:EYR83997.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
methylase
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_24
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25461..26552)
|
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000366F85F
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EYR83996.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K11895 type VI secretion system protein ImpH
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26516..27139)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BWX7_9RHIZ
Type VI secretion protein, VC_A0110 family {ECO:0000313|EMBL:EYR83995.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K11896 type VI secretion system protein ImpG
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_26
unknown
|
Not on your lists |
28035..28241
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_27
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28298..29806)
|
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003817D21
Type VI secretion protein IcmF {ECO:0000313|EMBL:EYR83994.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
icmF; Type VI secretion protein IcmF; K11891 type VI secretion system protein ImpL
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_28
unknown
|
Not on your lists |
29944..31182
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_29
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31773..33557)
|
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000371E5AA
Uncharacterized protein {ECO:0000313|EMBL:EYR83993.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
|
|
SCNpilot_expt_1000_bf_scaffold_1502_curated_30
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33554..34894)
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EEL4_9RHIZ
Type IV / VI secretion system protein, DotU family {ECO:0000313|EMBL:EYR83992.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K11892 type VI secretion system protein ImpK
|