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SCNpilot_expt_1000_bf_scaffold_1502_curated_24

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(25461..26552)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI000366F85F similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 362.0
  • Bit_score: 299
  • Evalue 4.80e-78
Type VI secretion protein, VC_A0111 family {ECO:0000313|EMBL:EYR83996.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 363.0
  • Bit_score: 477
  • Evalue 1.80e-131
hypothetical protein; K11895 type VI secretion system protein ImpH similarity KEGG
DB: KEGG
  • Identity: 35.5
  • Coverage: 361.0
  • Bit_score: 226
  • Evalue 1.20e-56

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGCCAGCACGCGCCGGCGACCGCATACTTCTCTAGAGCGCGACCTCTTCGAGGCGCCGCAATTCTACGAGCTGTTCCAGGCCATGGCGCTTCTGGAGCGGATGGCGGCGCGCGAGCATGACGAGACCGGCCTGCCGCCGGTCGATCCGCTCGGCCAAGGCAGCGATCCCTCGCGGGCGACCCTTGCCGTCCGCTCCGCCGTGCCGCTCGGCTTTGCGGCGGCGGAGGTCAATTCCGTGCGCCGCCCGCGAGACGGCGGCCCGATCGAGATGATCCAGACCATCGTTGGCCTCACCGGTCCCTCCGGCGTGCTGCCGCATGCGCTGAGCGAGCTGGTGCAGGTCAGCGTACGCGAGCGCAATCTGGGGCTTCGCGACTTTCTCGACGTCTTCAACAACCGGCTCGCCGGCCTGCTCTACAATGCCTGGGCCAAATACCGCATCGTCGCGGAGCGCCAGCGCTCGCTGTCGGTCGGCACCGCAACGCCCGCCGATCACGCGCTGAAATCGCTGGTCGGCCTCGGCCTGCCGGCGACCGCCAACCGCACCAGCGCGCCGGATGCGCTTTTCGTCTATTTCGGCGGGCTGTTCGGCCGTCAGTCCCACTCCGCCGTCGCCGTCGAGCGCGCACTGGCCGGCATCTTCGGCCACCGGCTGGATATCGCGCAGTTCTGCGGCGAATGGCTGCCGATCGCGGTGAACGACCGCACGCGCCTGCCGGAGAGGGCCTCTCCCGAAGGCAGTTTCGCGAGGCTTGGCGACGACGCGGTGATCGGCGGCAAGATCTTCGAAGTGCAATCGACGGTGCGCATCAACATCCGCGCCCTCGACTATCCACATTTCCGCTCGCTGCTGCCGGACGGCAAACGGGCGCAGCTTTTCACCGATGTCGCAGCCCATGCGCTCGGCGCCGACAAGACCTTCCGGGTCAGGCTGGAGCTGAAGCCCGACCAAGTGCCGGGCCTCAGGCTCGGCAAGGACCGCGACGACCCCGCCGCCAGCCGGCTCGGCTGGAACACATGGCTCTCCTCGGACCGGCCGAGACGGGATATCCCCTTCGCCGACATCCGCCCGACGCCGCATCTGCGATAA
PROTEIN sequence
Length: 364
MASTRRRPHTSLERDLFEAPQFYELFQAMALLERMAAREHDETGLPPVDPLGQGSDPSRATLAVRSAVPLGFAAAEVNSVRRPRDGGPIEMIQTIVGLTGPSGVLPHALSELVQVSVRERNLGLRDFLDVFNNRLAGLLYNAWAKYRIVAERQRSLSVGTATPADHALKSLVGLGLPATANRTSAPDALFVYFGGLFGRQSHSAVAVERALAGIFGHRLDIAQFCGEWLPIAVNDRTRLPERASPEGSFARLGDDAVIGGKIFEVQSTVRINIRALDYPHFRSLLPDGKRAQLFTDVAAHALGADKTFRVRLELKPDQVPGLRLGKDRDDPAASRLGWNTWLSSDRPRRDIPFADIRPTPHLR*