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SCNpilot_expt_1000_bf_scaffold_1502_curated_27

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(28298..29806)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003817D21 similarity UNIREF
DB: UNIREF100
  • Identity: 39.4
  • Coverage: 505.0
  • Bit_score: 365
  • Evalue 7.60e-98
Type VI secretion protein IcmF {ECO:0000313|EMBL:EYR83994.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.8
  • Coverage: 505.0
  • Bit_score: 597
  • Evalue 2.20e-167
icmF; Type VI secretion protein IcmF; K11891 type VI secretion system protein ImpL similarity KEGG
DB: KEGG
  • Identity: 30.5
  • Coverage: 534.0
  • Bit_score: 262
  • Evalue 3.70e-67

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
ATGCCCGCCGTCCAGTCACTGCCCGTCTGGCGGCCGGTCGATCACATGGGGCTTACCGGCCCGCAGGCGCTGTCGCGGGTCAGCGGCAACGGTTTCTGGGACGGCGTGCCGGGCCTTTATACGCGCGACGGCCTCATCGGCACGATGCGCGAGGTCGCGGCGACGGCGGCGCGCCATCTCGCCGACGATCTCTGGGTGATGGGCGACGACGCGCCGCTCGGCGAGCGCGACAGCGCCCGCATCCGCGACGGCATCCTCGATCTCTACCGCGTCGACTACATCAACAAATGGTCGTCCTTGCTCGCCGATATCGGCCCGGCCGGTGCCGACCGCGCCGTCGATGTCGCCCATTCCATCGCCATCATCACCGGCAATCCCTCGCCGCTCAAGGAACTGCTGATCGCCATCGCCGCCGAGACGGATCTGGAGGCGGCGACGACCGTCGTCCTCGACGCCGCCGTCGGCGCGACCACGGCGCGCATCAAATCCGTGACCGGCTCGGCCTACCAGCCGCGCCGCAGCGTCGACGTCGCCAAGTCGGTTTCCGAATATTTCCGCGCCTTCCGCAATGCGGTGACGGCGCCGGAGGGGCAGCAGGCGCCGGCCGACGCCATGCTGGCGGCGATGCAGCCGCTCTATCGCATGCTCAACCACGTCGCCAATGGCGGCGACGTGCTGGAACTCGGCACCGAGCCGCAGACGCTGCTGAAGGATCTCGCCAGCCGCAACGACAACCTGCCGCCGGTGCTACAGCCGGTCTTTGCCCGCATCCTCGCGCAGGTGGCGGCGATCACCGGCGGCAGCTCGCGCGAGCGGCTGGCGCAGATCTGGAATACGACGGTGCTGCCGCTCTGCGATGCGACGATGACGGCGCGTTATCCCTTCGACCGCACCGCCGCCAACGACACGTCGCTGGAGGATTTCGCAAAACTGTTCGGCCCCAAGGGCGCCATCGCCGGTTTCCACAACGATTACCTGAAGCCGTTCATCGACACGACCACCCATCCCTGGCGCTGGCGGCCGGGCCAGCAGGTGGGACTCGGCTTCGACGACGCGACGCTGGCGGCCCTCGAACGCGCCAATGCCATCACCACGATGTTCTTCTCCGACCAGGAGAAGCCGAACCTCGATTTCATGATCACGCCTGGCAAGCTGGACGCCAAGGCGCGCGCCTTCGTGCTCGATGCCGGCGGGCAATCCCTGCTCTACAGCCACGGGCCGATCGTCGATACGCCGTTCCAGTGGCCGCCGCAGAACGTATCGGCCGGCGCCAATCTCTCGGTCATGCCGGAGGTGCAGGGCGAGCGCAATCTCATCGCCCGCCAAGGCCCCTGGGCGATCTTCCGCCTGCTCGACAGCTTCCGCATGATGAGCAAGCAGCCGACCGACAGCGTCGATTATCTCGCCCGCGTCGGCAGCCGCCGGGTGCTGCTGCGGGTCACGGCCTCGGCGACGCGCAATCCTTTCGCCAAGAACATCCTCGCGGGCTACGCCTGCCCGCAACTGTAG
PROTEIN sequence
Length: 503
MPAVQSLPVWRPVDHMGLTGPQALSRVSGNGFWDGVPGLYTRDGLIGTMREVAATAARHLADDLWVMGDDAPLGERDSARIRDGILDLYRVDYINKWSSLLADIGPAGADRAVDVAHSIAIITGNPSPLKELLIAIAAETDLEAATTVVLDAAVGATTARIKSVTGSAYQPRRSVDVAKSVSEYFRAFRNAVTAPEGQQAPADAMLAAMQPLYRMLNHVANGGDVLELGTEPQTLLKDLASRNDNLPPVLQPVFARILAQVAAITGGSSRERLAQIWNTTVLPLCDATMTARYPFDRTAANDTSLEDFAKLFGPKGAIAGFHNDYLKPFIDTTTHPWRWRPGQQVGLGFDDATLAALERANAITTMFFSDQEKPNLDFMITPGKLDAKARAFVLDAGGQSLLYSHGPIVDTPFQWPPQNVSAGANLSVMPEVQGERNLIARQGPWAIFRLLDSFRMMSKQPTDSVDYLARVGSRRVLLRVTASATRNPFAKNILAGYACPQL*