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SCNpilot_expt_1000_bf_scaffold_2893_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(2910..3224)

Top 3 Functional Annotations

Value Algorithm Source
UPF0235 protein Arad_4365 n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JCH8_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 143
  • Evalue 9.70e-32
UPF0235 protein RRH01S_04_03020 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 104.0
  • Bit_score: 146
  • Evalue 2.80e-32
hypothetical protein; K09131 hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 103.0
  • Bit_score: 143
  • Evalue 3.10e-32

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
GTGACCAGCCCCTTCAAGGCGCTGGCCGATGGCGTCAGCCTCCGCCTGCGGTTGATGCCGAATGGCGGTCGCGACGCAATCGACGGCATCGAGACCGATGCCAACGGCGACGTTTTCCTGAAGGCGCGGGTGAGCGCGGTGCCGGAGGACGGCAGGGCCAACAAGGCGCTGATCGCGCTGCTCGCCAAGCGGCTGAAGATCGCCAAATCGGCGATCTCGGTCGTCTCAGGCGAAACCGCCAGAAAGAAAATCCTCCGGATCGAGGGCGACCCGGAGGATGTGATCGGAAAGATCGAAAGCCTGCTGAAAGGCTGA
PROTEIN sequence
Length: 105
VTSPFKALADGVSLRLRLMPNGGRDAIDGIETDANGDVFLKARVSAVPEDGRANKALIALLAKRLKIAKSAISVVSGETARKKILRIEGDPEDVIGKIESLLKG*