ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2893_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(9859..10788)

Top 3 Functional Annotations

Value Algorithm Source
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 309.0
  • Bit_score: 480
  • Evalue 2.40e-132
hemC; porphobilinogen deaminase (EC:2.5.1.61); K01749 hydroxymethylbilane synthase [EC:2.5.1.61] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 309.0
  • Bit_score: 472
  • Evalue 8.50e-131
  • rbh
Porphobilinogen deaminase n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAI6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 309.0
  • Bit_score: 480
  • Evalue 1.70e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCAAACAAAACCTTTGCGGATCGGCACGCGCGGCAGCCCCTTGGCGCTGGCCCAGGCTCACGAAACCCGCGACCGGCTGATGGCCGCCCACGGCCTGCCGGCCGAGATGTTCGAGATCGTCGTGCTCTCGACCACCGGCGACCGCGTCACCGACCGGGCGCTGTCGGAAATCGGCGGCAAGGGACTGTTCACCCAGGAACTGGAGGAGCAACTGACCTCCGGCGAACTCGACATGGCCGTGCATTCCTCCAAGGACATGCCGACCGTGCTGCCCGACGGCCTGCACCTTTCCGCCTTCCTGCCGCGCGCCGATGTACGCGACGCGGTGATCGGCCGAAGCGCCCCGACGCTGATGGCGCTGCCTCACGGCGCCACGGTCGGCTCCTCGTCGCTGCGCCGCCAGGCGCTGATCCGTCGGCTGCGCCCGGATATCACCGTCATTACCTTTCGCGGCCAGGTGGAGACGCGGCTGCGCAAACTCGCCGAAGGCCAGGTCGATGCGACGCTGCTCGCCGTCGCCGGCCTCGACCGGCTCGGCAAGACCGGCATCGTCACCGAATTCCTCGATCCTGCCGAATTTCCGCCAGCCCCGGCGCAAGGGGCGATCTGCATCGAATGCCGTATCGACGATATCAGGATCAACGCCCTGCTCGACGCCGTCAATCACCGCCCGACCTATGACGCCGTCACCTGCGAACGCGCTTTCCTCGCCGCGCTCGACGGCTCCTGTCGTACGCCGATTGCCGGCCTGGCGCTCACCGAGGGCGACGCGCTGTTTTTCTCCGGCATGATCCTCACTCCGGACGGCCAGACCGTCCACCGCATCGCCATTGACGGCAAGACGGCGGAAGCGGCAAACCTCGGCCGCAAGGCGGGCGAAGAGGTGCGCGCCATCGCCGGCAGCGGTTTCTTCGAGGGATGGAGCTGA
PROTEIN sequence
Length: 310
MQTKPLRIGTRGSPLALAQAHETRDRLMAAHGLPAEMFEIVVLSTTGDRVTDRALSEIGGKGLFTQELEEQLTSGELDMAVHSSKDMPTVLPDGLHLSAFLPRADVRDAVIGRSAPTLMALPHGATVGSSSLRRQALIRRLRPDITVITFRGQVETRLRKLAEGQVDATLLAVAGLDRLGKTGIVTEFLDPAEFPPAPAQGAICIECRIDDIRINALLDAVNHRPTYDAVTCERAFLAALDGSCRTPIAGLALTEGDALFFSGMILTPDGQTVHRIAIDGKTAEAANLGRKAGEEVRAIAGSGFFEGWS*