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SCNpilot_expt_1000_bf_scaffold_5261_curated_3

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(3041..3658)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PMA2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 201.0
  • Bit_score: 362
  • Evalue 2.60e-97
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDN94573.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 205.0
  • Bit_score: 371
  • Evalue 7.90e-100
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 188.0
  • Bit_score: 163
  • Evalue 7.30e-38

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGCCCAACCGAATGATCCGGCCCGTCCCGGAAGACACCACCCGTGAGCGCATCCTGAAAGCCGCGATACTTCGCTTCTCCACCCACTCCTATGAGGAAACCGGGTTGCGAGACATTGCCGCCGATGTCGGTGTCGACATGGCCTATGTTCATCGTTCCTTCGGTTCGAAGGAGAAGCTGTTCCGGGAGGCTGTCAAGGCAATCGTTCGTCCCGAGGTCTGGCTGGTCGGCGAGGCGAGTGAGTTACACGTAACGTTGGCAAAAGAGGTTCTAGCCGAGAAGGGCGCCAACGAGATCCGATCTTTTGACGTCCTCGCTAGATCTTTTTCCAGTCCCGAGGCTTCGCGTGTTTTTCGCGAACTCATTGACGAGGGGCTCGTCAAGCCAATGGCTTCCAAATGTCCGGTTGTGTCCGAACAGCGCGCCTCCATGGTCGCCGCGTTCCTGGCCGGCGTCAGCATCCTTCGTGACGTCATCGGTACGCCAGCGCTGCAGAGTGGTGGAAATGATCGTGAACTGATGGCTCTGGTCTCCCAGGTCGTCGAGTTCATCATGAACGAAGACAAGGGATGTCAAACCATGACGACCGCCGTGCCGATCAGTCGGGAGCCGCAATGA
PROTEIN sequence
Length: 206
MPNRMIRPVPEDTTRERILKAAILRFSTHSYEETGLRDIAADVGVDMAYVHRSFGSKEKLFREAVKAIVRPEVWLVGEASELHVTLAKEVLAEKGANEIRSFDVLARSFSSPEASRVFRELIDEGLVKPMASKCPVVSEQRASMVAAFLAGVSILRDVIGTPALQSGGNDRELMALVSQVVEFIMNEDKGCQTMTTAVPISREPQ*