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SCNpilot_expt_1000_bf_scaffold_5261_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5261_curated_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1255)
DNA (1254bp) protein (418aa)
phosphate acetyl/butyryltransferase; K00625 phosphate acetyltransferase [EC:2.3.1.8]
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA0_9RHIZ
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase {ECO:0000313|EMBL:CDN94575.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_expt_1000_bf_scaffold_5261_curated_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1263..3044)
DNA (1782bp) protein (594aa)
poly-beta-hydroxybutyrate polymerase domain protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Poly-beta-hydroxybutyrate polymerase domain protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4B9_9RHIZ
Poly-beta-hydroxybutyrate polymerase domain protein {ECO:0000313|EMBL:EKF42206.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_5261_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3041..3658)
DNA (618bp) protein (206aa)
TetR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PMA2_9RHIZ
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CDN94573.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5261_curated_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3847..4869)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4B3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42208.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5261_curated_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4879..6009)
DNA (1131bp) protein (377aa)
Multidrug resistance efflux pump n=1 Tax=Nitratireductor indicus C115 RepID=K2NWM1_9RHIZ
Multidrug resistance efflux pump {ECO:0000313|EMBL:EKF42209.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
multidrug resistance efflux pump; K03543 multidrug resistance protein A
SCNpilot_expt_1000_bf_scaffold_5261_curated_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6051..7250)
DNA (1200bp) protein (400aa)
Sodium/glutamate symporter n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA6_9RHIZ
Sodium/glutamate symporter {ECO:0000313|EMBL:EKF42210.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
gltS; sodium/glutamate symporter
SCNpilot_expt_1000_bf_scaffold_5261_curated_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7366..7641)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4C4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42211.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5261_curated_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7725..8381)
DNA (657bp) protein (219aa)
TetR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PMA7_9RHIZ
TetR family transcriptional regulator {ECO:0000313|EMBL:EKF42212.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_5261_curated_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8707..9225
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N4B6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42213.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5261_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9260..9514
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWM6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42214.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_5261_curated_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10128..10964
DNA (837bp) protein (279aa)
Secretion protein HlyD family protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NSA9_9RHIZ
Secretion protein HlyD family protein {ECO:0000313|EMBL:EKF42215.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
efflux transporter; K01993 HlyD family secretion protein
SCNpilot_expt_1000_bf_scaffold_5261_curated_12
unknown

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comp(10970..11221)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_5261_curated_13
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11572..11976
DNA (405bp) protein (135aa)
ABC transporter related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4C9_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EKF42216.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC transporter related; K13926 ribosome-dependent ATPase
Displaying 13 items

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