ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5261_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(7725..8381)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2PMA7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 218.0
  • Bit_score: 417
  • Evalue 9.50e-114
TetR family transcriptional regulator {ECO:0000313|EMBL:EKF42212.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 218.0
  • Bit_score: 417
  • Evalue 1.30e-113
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 209.0
  • Bit_score: 102
  • Evalue 2.10e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitratireductor indicus → Nitratireductor → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGACGCGGACCGACAAGATCAATCACGCGCGTGTGGCGAGCCACCACGGCGGACGGCCGACACCGGCGGAGTCTGAACGCATATCGGCCCGGATCATGGCGGCTGCGCGCAAGCTGTTCCTGCGAGACGGGTTTGCGCAGACGAGCATGGACGCGATCGCCGCGGAAATTGGAATTTCCAAGCGGACTCTTTATTCGCGCCATCCAGGCAAGGCCGCACTTTTCGAAGCGATTGTCCTCGATGTTGTAAACACGGGCCTATCGAATATCGTCACGGAGCAGTTGTCGGGCAAGACTCCGCGGGACAAGCTGCTGGCTTTGTCGTTGCGCATTCTAGAAGTAGCGACTGATCCGCTCATCATTTCCCTGGAAAGAGTTGTTGTTGGCGAGTCGTGGCAGTTTCCGAAGTTGGCGAGTCTCGTCGGCCAGTATGGAATGCCGCCGATCCGCGAGGAGGTAATGGCCGTGCTGCGCGACCACGGTGCAAGTGAACCCGGTCTGGCCCGTGATGCGGAGATATTCCTGTCCATCACGATGATACCGCAACTGCGGCAGGCCGTTCTTCAGCGGACGCCGCCGGGGATCGCGGGGATAGACCGGGCCGCCCTTGAACGCACCATCGATATCTTCGTCCGAGGAATTGAGATGGAACTATGA
PROTEIN sequence
Length: 219
MTRTDKINHARVASHHGGRPTPAESERISARIMAAARKLFLRDGFAQTSMDAIAAEIGISKRTLYSRHPGKAALFEAIVLDVVNTGLSNIVTEQLSGKTPRDKLLALSLRILEVATDPLIISLERVVVGESWQFPKLASLVGQYGMPPIREEVMAVLRDHGASEPGLARDAEIFLSITMIPQLRQAVLQRTPPGIAGIDRAALERTIDIFVRGIEMEL*