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SCNpilot_expt_1000_bf_scaffold_1298_curated_90

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 89537..90409

Top 3 Functional Annotations

Value Algorithm Source
Acetate operon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8J1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.0
  • Coverage: 272.0
  • Bit_score: 482
  • Evalue 4.20e-133
Acetate operon repressor {ECO:0000313|EMBL:EYR82262.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.0
  • Coverage: 272.0
  • Bit_score: 482
  • Evalue 5.90e-133
acetate operon repressor similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 271.0
  • Bit_score: 455
  • Evalue 1.30e-125

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGCAGGGCGGCTATGAGAGACTCACGAAAAAGGAAGAGGCAGGCATGGCCGGGCGGCAGGAAACGACGAGGGGCAAACCGGGGCGCAAGGCCGGCGAGAACGCCGCGCCCTCTTCCGTTCAGGTGCTGGACCGCAGCCTGAAGCTGCTGGAGCTGGTGGCCGGCGCCGATGGCGCGGGGCTGACCGACCTCGCCGACCAGTCCGGCATGGCGCCGTCGACCGTCCACCGGCTGCTGACGTCGCTGGCCGGCCACGGCATGGTGACCCATGACGCCGAGACCGGCGCCTGGACCATCGGCGTCAAGGCCTTCGAGATCGGCACCGCTTACCTGCGTTTCCGCAAGCTCGGCACGATCAGCCGGCCATTTCTCAAGCAATTGATGGAGGGTTGCGGCGAGACCGCCAATATCGCCATCGAGGACGACGGCGACGTGGTGTTCATCTCGCAGGTGGAAAGCCATGCGCCGATGCGCGCCTTCTTCCGCCCCGGAAGGCGCGGGCCGATCCATGCGTCGGGCATCGGCAAGGCGATCCTCTCGACCTGGACGGATGCCCGCATCGCGGCGCTACTGGCCGGCCGCAGCCTGCAGCATTTCACCGACAAGACCCGCGACAGCCTGCCCCTGCTGCTCGACGACATCGCCGGCATCCGCGCCCGCGGCTGGTCGATCGACGACGAGGAGCACACGCTCGGCATGCGCTGCGTCGCCGCCCCCATCTTCGACGAATATGGCGAGGCGGTCGCCGGCATCTCCGTCTCCGGCCCGGCCGTGCGCCTGCCGGACGAGAAGGTGGACGCGCTCGGACCCATCGTGGTGAAGGCAGCGGCGGGGCTGACCAAGGCGATGGGCGGGCGTGTGGCCGGCGCTTGA
PROTEIN sequence
Length: 291
MQGGYERLTKKEEAGMAGRQETTRGKPGRKAGENAAPSSVQVLDRSLKLLELVAGADGAGLTDLADQSGMAPSTVHRLLTSLAGHGMVTHDAETGAWTIGVKAFEIGTAYLRFRKLGTISRPFLKQLMEGCGETANIAIEDDGDVVFISQVESHAPMRAFFRPGRRGPIHASGIGKAILSTWTDARIAALLAGRSLQHFTDKTRDSLPLLLDDIAGIRARGWSIDDEEHTLGMRCVAAPIFDEYGEAVAGISVSGPAVRLPDEKVDALGPIVVKAAAGLTKAMGGRVAGA*