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SCNpilot_expt_1000_bf_scaffold_2725_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3..587

Top 3 Functional Annotations

Value Algorithm Source
Conjugation TrbI family protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDW9_ZYMMN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 386
  • Evalue 1.60e-104
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 386
  • Evalue 5.00e-105
Conjugal transfer protein TraI {ECO:0000313|EMBL:KFI26667.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 194.0
  • Bit_score: 386
  • Evalue 2.20e-104

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Taxonomy

Haematobacter missouriensis → Haematobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGGATCGGATCATGGCGCCAGCCTCGCCCTACATCCTTCAGGCAGGGGCCGTAATCCCGGCGGCGATGATTACCGGCATCCGCTCGGACCTTCCCGGCCAGATCACCGCGCAGGTCACGGAAAATGTCTATGACAGCCCGACCGGCAGCCTGCTGCTAATCCCGCAGGGAACGCGCATCATCGGTCAGTATGACGCCGGTGTGCAGTTCGGTCAGCGCCGCGTGCTGCTGGTCTGGAACCGCCTGATCCTGCCCAACGGCCGCTCTATCGTGCTGGAGCGCCAGCCCGGTGCGGACGCTTCCGGCTATGCCGGGCTGGAAGATGGCGTTGATTACCACTGGTGGGATCTCATGAAGGCGGCGGGGCTGTCCACGCTGCTCGGCATCGGCACGGAACTGGCGACCGACGACGAGGATCGTCTGATCCGGGCCATCCGCGACGGAGCGCAGGATACCATCAATCAGGCAGGGCAACAGATCGTCCAGCGCCAGTTGCAGGTCGCGCCGACCCTGACGATCCGGCCGGGCTACCCGGTCAGGGTCATCGTTACCCGCGATCTCGTACTCGAACCTTATAGGAACTGA
PROTEIN sequence
Length: 195
MDRIMAPASPYILQAGAVIPAAMITGIRSDLPGQITAQVTENVYDSPTGSLLLIPQGTRIIGQYDAGVQFGQRRVLLVWNRLILPNGRSIVLERQPGADASGYAGLEDGVDYHWWDLMKAAGLSTLLGIGTELATDDEDRLIRAIRDGAQDTINQAGQQIVQRQLQVAPTLTIRPGYPVRVIVTRDLVLEPYRN*