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SCNpilot_expt_1000_bf_scaffold_2725_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2725_curated_1
Haematobacter missouriensis, Haematobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..587
DNA (585bp) protein (195aa)
Conjugation TrbI family protein n=1 Tax=Zymomonas mobilis subsp. mobilis (strain NCIB 11163) RepID=C8WDW9_ZYMMN
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugal transfer protein TraI {ECO:0000313|EMBL:KFI26667.1}; TaxID=366616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Haematobacter.;" source="Haematobacter missouriensis.;"
SCNpilot_expt_1000_bf_scaffold_2725_curated_2
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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700..1785
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4D7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42226.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_2725_curated_3
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1785..3587
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NSC0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42225.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2725_curated_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3587..6145
DNA (2559bp) protein (853aa)
Helicase n=1 Tax=Nitratireductor indicus C115 RepID=K2NWN4_9RHIZ
Helicase {ECO:0000313|EMBL:EKF42224.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
helicase
SCNpilot_expt_1000_bf_scaffold_2725_curated_5
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7035..8036)
DNA (1002bp) protein (334aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ornithine carbamoyltransferase; K00611 ornithine carbamoyltransferase [EC:2.1.3.3]
Ornithine carbamoyltransferase n=1 Tax=Nitratireductor indicus C115 RepID=K2PMB5_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2725_curated_6
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8049..9275)
DNA (1227bp) protein (409aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
arginine deiminase; K01478 arginine deiminase [EC:3.5.3.6]
Arginine deiminase n=1 Tax=Nitratireductor indicus C115 RepID=K2P4D3_9RHIZ
SCNpilot_expt_1000_bf_scaffold_2725_curated_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9287..10720)
DNA (1434bp) protein (478aa)
C4-dicarboxylate anaerobic carrier n=1 Tax=Nitratireductor indicus C115 RepID=K2NSB5_9RHIZ
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:EKF42220.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
C4-dicarboxylate anaerobic carrier
SCNpilot_expt_1000_bf_scaffold_2725_curated_8
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11082..11732)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2NWN0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF42219.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2725_curated_9
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11770..12810)
DNA (1041bp) protein (347aa)
adhA2; alcohol dehydrogenase; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
Alcohol dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2N4C1_9RHIZ
Alcohol dehydrogenase {ECO:0000313|EMBL:EKF42218.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_expt_1000_bf_scaffold_2725_curated_10
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12896..14008)
DNA (1113bp) protein (371aa)
ABC transporter n=1 Tax=Nitratireductor indicus C115 RepID=K2PMB1_9RHIZ
ABC transporter {ECO:0000313|EMBL:EKF42217.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC-2 type transporter; K09686 antibiotic transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2725_curated_11
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14012..15574)
DNA (1563bp) protein (521aa)
ABC transporter related protein n=1 Tax=Nitratireductor indicus C115 RepID=K2P4C9_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EKF42216.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
ABC transporter related; K13926 ribosome-dependent ATPase
Displaying 11 items

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