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SCNpilot_expt_1000_bf_scaffold_1591_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 8244..9143

Top 3 Functional Annotations

Value Algorithm Source
Putative integrase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UGY7_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 62.2
  • Coverage: 299.0
  • Bit_score: 372
  • Evalue 3.70e-100
Putative integrase {ECO:0000313|EMBL:CEL26563.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 299.0
  • Bit_score: 420
  • Evalue 2.80e-114
integrase similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 286.0
  • Bit_score: 311
  • Evalue 3.20e-82

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Taxonomy

Sinorhizobium fredii → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAAAAGCCTACACTTCGACCTCCTCAACCTGACCCGCCACAACGGGGAGGGGTCTTATTCGACCCAAGCGTGCCGCGCACGAGGCCTTCAGCAGTTGGCCGACGAGCTGCACGCCTTGGGTTATAAATTGCAAGCTGCCAAGCACCTGAAGCCGCGCCATGTGGAGGCGCTTGTAGCTAGTTGGAAGGCAAACCGCCTCAGTGACGGCACAATCCGCAACCGGCTGGCATGGGCGCGCTGGTGGCTGCGACACGTTGATAAGAGCCGCGCCATTGCCGCCAGCAATGAGGGATACGGTTTGCAGCGCCGGGAACGCTTCAAGGGCAACCGCGCCCGTCGCCTCGATGCCGACGCCCTTGCCCGCCTCAACGATGAGCGGGTGGCCCTCGCCCTCAAGCTGGAAGCCGCTTTTGGTCTGCGCCGGGAAGAGGCCCTAAAGATGTTCCCCCGCATGGCTGACCGGGGCAACCGGCTCATCCTGCAAGCCAGTTGGACGAAAGGCGGCCGGTATCGAGAAATCCCTATCGTGCACCCGAAACAACGGGCGCTCCTCGAGGAGATTAAAGCCTTATGTGGCGATGGGAGTCTGATAGGCGATGGCCGGAACTACAAGCGCGCCCTGAAGCATTACGAATATACCACCCTCAAGGCCGGGCTTCGGAATTGTCACGCTTACCGTCATGCTTACGCCCAGTGGCGATACAAAGCCCTCACCGGCTGGGCCTGTCCCGCTGCGGGCGGTCCAACCCGCGGCGAGATGACCGCGGCACAATGGGAAACTGACCGGCGCGTACGGCTCGAAATTTCCCACGAGCTGGGGCACGGCCGCATTGACGTGACAGACACCTACCTCGGCCGGGCCATTCCGGCACGGGTGCAGGAAAGCCGCGCCGCATGA
PROTEIN sequence
Length: 300
MKSLHFDLLNLTRHNGEGSYSTQACRARGLQQLADELHALGYKLQAAKHLKPRHVEALVASWKANRLSDGTIRNRLAWARWWLRHVDKSRAIAASNEGYGLQRRERFKGNRARRLDADALARLNDERVALALKLEAAFGLRREEALKMFPRMADRGNRLILQASWTKGGRYREIPIVHPKQRALLEEIKALCGDGSLIGDGRNYKRALKHYEYTTLKAGLRNCHAYRHAYAQWRYKALTGWACPAAGGPTRGEMTAAQWETDRRVRLEISHELGHGRIDVTDTYLGRAIPARVQESRAA*