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SCNpilot_expt_1000_bf_scaffold_2245_curated_15

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(13078..14028)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport system permease protein DppB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRX1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 316.0
  • Bit_score: 561
  • Evalue 4.50e-157
ABC-type dipeptide/oligopeptide/nickel transport system permease component {ECO:0000313|EMBL:EYR84429.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 316.0
  • Bit_score: 561
  • Evalue 6.30e-157
putative substrate-binding component of ABC transporter; K02033 peptide/nickel transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 308.0
  • Bit_score: 451
  • Evalue 2.70e-124

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGGCGAGGATTTCCTGGGGACTTTTGCACCGGCTGGGAGGCATGCTGATCGTGCTTGCCCTCGTCGTGACGGTGGTTTTCATCATCGTCCGGGTCACCCCGGGCGACCCCGCAGCGGTCATGCTGGGGTCGGATGCGACCCCGGAAGACATCGCGCAACTGCGCTCGAGGATGGGGCTGGACGCGCCGCTGATCGTGCAGTACGGGCAGTTCGTCGGCGGCATCCTCAGGGGTGATCTCGGCCAGTCGATCTTCCTGAACCACCCGGTGACGCAGGCGCTCGCCGCGCGCGCCGAACCGACCTTCTTCCTGACGCTGTTCTCGATCCTCATCGCGGTGGCGATCGCGCTGCCGGTCGGCGTGCTCTCCGCCGTCCGGCGCGGCACGCTTTTCGACCAGATCGTCGTCACCCTCACCATGGTGGCGGCAAGCGTGCCGAGCTTCTGGCTGGGGCTGATGCTCATCCAGGTCTTCGCGGTCGGCACGGGCTGGTTCCCGGCCTCCGGTTATGGCGGCCCGGATACGCCCTTCCTGGAGCGGCTGCACCACCTCGTGCTGCCGGCCGTGGCGCTCGGCGTCGTCAATTCGGCGCTGATCACCCGCTTCACCCGTGCCGCGATGCTCGATGTCCTCGGCGAGGACTACGTGCGCACCGCCCGCGCCAAGGGGGCGAACGAGCGCCGGGTGATCCTCAAGCATGCGCTGAAGAACGCGCTGATCCCGATCATCACCGTCATCGGCCTGTCGGTCGCCATGCTGGTCGCCGGCGCCGTCGTCACCGAAACCGTGTTCGGCCTGCCGGGGGTCGGAAATCTGGTGGTCTCGGCCGTGCTGCGGCGCGACTATCCGGTCATCCAGGGCACGCTGCTGGTTGTCGCCGCAATCTACGTGCTCATCAATTTCATCGTCGACATGCTCTACATTCTCGTCGATCCGAGGGTCCGCCTATGA
PROTEIN sequence
Length: 317
MARISWGLLHRLGGMLIVLALVVTVVFIIVRVTPGDPAAVMLGSDATPEDIAQLRSRMGLDAPLIVQYGQFVGGILRGDLGQSIFLNHPVTQALAARAEPTFFLTLFSILIAVAIALPVGVLSAVRRGTLFDQIVVTLTMVAASVPSFWLGLMLIQVFAVGTGWFPASGYGGPDTPFLERLHHLVLPAVALGVVNSALITRFTRAAMLDVLGEDYVRTARAKGANERRVILKHALKNALIPIITVIGLSVAMLVAGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGTLLVVAAIYVLINFIVDMLYILVDPRVRL*