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SCNpilot_expt_1000_bf_scaffold_1531_curated_14

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(15121..16425)

Top 3 Functional Annotations

Value Algorithm Source
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 443.0
  • Bit_score: 487
  • Evalue 1.60e-134
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 443.0
  • Bit_score: 486
  • Evalue 8.00e-135
tRNA modification GTPase MnmE n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JEW4_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 443.0
  • Bit_score: 486
  • Evalue 2.50e-134

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGAACGACACGATTTTTGCCTTATCCAGCGGCGGTCTTCCGTCCGGCGTGGCAGTCATCCGTCTCAGTGGGCCGGCAGCGTTCGATATTTGTCGACAAATCGTCGACTCGATACCGGAACCACGAAAAGCCGCTTTGCGCACGCTGCACCGGCGCGATGGCCAACCGCTGGACCATGGCCTCGTCCTCCTTTTCCCCGCCCCGGCGTCCTTCACCGGCGAGGATTGCATCGAGCTGCAAATCCACGGCGGCAAGGCGGTTGTCTCTGCCGTGCTGGACGAACTGGGGACATTTCCCGGCGCCCGTCTTGCAGAAGCCGGTGAATTCTCTCGCCGGGCCTTCGAAAACGGCCGCATCGATCTGGTTGAAGTCGAAGGCCTCTCCGACCTCATCAATGCCGAAACCGAAATGCAACGTCGCCTTGCGCTGGAGCAGATGGCCGGTCATGTCAGCGCGATCTACGACGGCTGGGCCGAACGCTTGAAATTCGCCCGCGCCATGATCGAAGCCGAACTCGATTTCCCTGACGAGGAAGACGTCCCAGGATCCGTCTCAGATCGCGTCTGGCACGATATGCGTCAACTCGCGTCGGAGATCGGCGATCACTTGACCCGTAGCAAAGGCGGCGAAATCATCCGCGATGGTCTCAAGGTCGTAATCTCCGGCCCGCCCAACGCCGGCAAATCGACCTTGTTCAATGCGCTTGTACAGCGCGACGCCGCCATCGTCACCAGCATTCCCGGAACCACGCGCGACATCCTCCAGACCGACATCTTCATCGACGGCTTTCCTGTCCGCCTGACTGATACTGCCGGTTTGCGTGAAACCGATGACGTCGTAGAACAGCTGGGCGTACAACGTGCACGAACTGCAACAGAGAGTGCTGACGTCGTTCTGCGTCTTCATAGCGCTGAGTTGGAGGTGGACAATACCCCAATCCAAACGGCAGGCCGCATTATCAATATTTGGGCGAAATCCGACGTTCACATCAAACCGGATGATTTTGAAATCGCGATTTCGGCCGAGACCGGCCAAGGATTGGAAGCGCTGAAAACCTTAATCGTTAAAGATGCTAAAGCCTTGACCGCGAACGGGTTCGTTCTCGCGTCTCGGCAGCGCCAACTCACGGCTCTGCGTACGACTCAAGAACGCATCGATGAAGCCTGTATCTCCCCTCATCTTCCGCTTGATCTGCGAGCTGAGATGCTTCGTCAAGCTGGCAATGAGCTTGGCAGGATTACCGGTCGTGTTGACGTCGAGCAGCTGCTTGACGTAATCTTCTCTCAATTTTGCATCGGGAAATGA
PROTEIN sequence
Length: 435
MNDTIFALSSGGLPSGVAVIRLSGPAAFDICRQIVDSIPEPRKAALRTLHRRDGQPLDHGLVLLFPAPASFTGEDCIELQIHGGKAVVSAVLDELGTFPGARLAEAGEFSRRAFENGRIDLVEVEGLSDLINAETEMQRRLALEQMAGHVSAIYDGWAERLKFARAMIEAELDFPDEEDVPGSVSDRVWHDMRQLASEIGDHLTRSKGGEIIRDGLKVVISGPPNAGKSTLFNALVQRDAAIVTSIPGTTRDILQTDIFIDGFPVRLTDTAGLRETDDVVEQLGVQRARTATESADVVLRLHSAELEVDNTPIQTAGRIINIWAKSDVHIKPDDFEIAISAETGQGLEALKTLIVKDAKALTANGFVLASRQRQLTALRTTQERIDEACISPHLPLDLRAEMLRQAGNELGRITGRVDVEQLLDVIFSQFCIGK*