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SCNpilot_expt_1000_bf_scaffold_2629_curated_9

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6365..6958)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FDT8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 196.0
  • Bit_score: 334
  • Evalue 9.60e-89
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 196.0
  • Bit_score: 334
  • Evalue 1.30e-88
rplY; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 197.0
  • Bit_score: 329
  • Evalue 7.40e-88

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGCCACGCATCTTACGAGCTCAAGGCCGAGGCGCGCGAACGGGTCGGTAAGGGGTCCTCCCGTGAACTTCGCCGCAACGGTTTCATTCCCGCTGTCATCTATGGTGACAAGCAGGCCCCGATTTCCATCGCGCTGTCGACCAACGAAGTCACCAAGCGCATCCATGGCGGTGGTTTCATGACCACGGTTGCCGTCATCGACGTCAACGGCGAGAAGATCCGCGTCCTGCCGAAGGACTATCAGCTGGATCCGGTGCGCGACTTCACCATGCATGTCGACTTCCTGCGCGTCTCCGCCGACAGCCAGGTCACGGTTCAGGTTCCGGTTCACTTCGTCAACGAAGAGAAGTCGGCCATCAAGACCGGCGCCGTGCTGAACGTCGTTCGTCACGAAGTCGAGCTGCACGTTCCGGCCAACGACATCCCGGAATTCATCACCGTCGACCTGTCAGGCTTCAAGGTCGGCGATGCCGTTCACATCTCGCATGTGAAGCTGCCAGCCAACGCCTCGCCCGTCATCGGCGACCGCGACTTCACGATCGCAACGATCGTTGCCCCGGCCGGCGGCATGGCGGAAGAAGCCAGCGAGTAA
PROTEIN sequence
Length: 198
MSHASYELKAEARERVGKGSSRELRRNGFIPAVIYGDKQAPISIALSTNEVTKRIHGGGFMTTVAVIDVNGEKIRVLPKDYQLDPVRDFTMHVDFLRVSADSQVTVQVPVHFVNEEKSAIKTGAVLNVVRHEVELHVPANDIPEFITVDLSGFKVGDAVHISHVKLPANASPVIGDRDFTIATIVAPAGGMAEEASE*