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SCNpilot_expt_1000_bf_scaffold_2026_curated_8

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(6503..7432)

Top 3 Functional Annotations

Value Algorithm Source
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWW8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 304.0
  • Bit_score: 555
  • Evalue 4.10e-155
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR79377.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 304.0
  • Bit_score: 555
  • Evalue 5.80e-155
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 64.6
  • Coverage: 305.0
  • Bit_score: 405
  • Evalue 1.70e-110

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGTCCAAGCCGTCCCTGCGCGGCCTACAAGCCTTTGAGGCGATCGGGCGTTGCGGCTCGGTCAGTGCGGCCGCGGCCGATCTCGACGTTTCGCCGGGGGCGATCAGCCAACTGGTTCGCAACCTGGAGCAATGTCTGGGACTGACGCTCCTGGAGCGTCGCGGCCGGCGCGTGGAGCTGTCCGCCTGGGGGCGACTTTATTATCGTGAAGTCGCCAAGGGGTTTCAGCAGCTCTCCCATGCCGCAAACGTGCTGACGCGCGCCAGGAATGAGAGCGGCGTCGTGCTCAGCGCTCTGTCATCGGTGGCGAGCAGATGGATCAGCCGCAAAATCTTCGATTGGCAATCCCTCTGTCCAGACTCGAACGTGCGCATTCTCGGGCAGGAACAGGAACCTCGACTCGGTGCGGAAGAAGTGGACTTCCGCATCACCTATGGCCGACGCTCCCATGTGCATGAACACGTTGCACATCTGTTCACGGACTGGGTCGTTCCGGCCTGTTCGCCCGCGCTGATTTCCAGCCGCGTTCCGCAATGTCCGCAGGACATTCTCACCTTCCCGCTTCTCAACGTGGAATGGGAGGCTGACTACAAGGCTTCTCCGCAATGGAAGGATTGGGCGAAGCTGATCTCCGCTGACGGCCATCAGACGTTTTCAGGTCTTTCCTTCACCCTGTCGAGCAGCGCTATCGATGCGGCCGCAAATGGAAGGGGCTTCGTGCTTGCACAGCTTTCGATGGTGCAGGAAGAGGTCGCAGCCGGCACGCTGATCGTCCCCTTCGACATCCGCATGCGGTTGCCCGAAAGCTATTATCTGGCATGGGACAGACCCGCCCTCGAAAAGCCGTTCGGACTGAGGTTCCACAAATGGCTGCTGGGTGTCGCAAGACAGCAGGACGCGGTTTCTTCGCCGAACGCGAATCCCGTCTAG
PROTEIN sequence
Length: 310
MSKPSLRGLQAFEAIGRCGSVSAAAADLDVSPGAISQLVRNLEQCLGLTLLERRGRRVELSAWGRLYYREVAKGFQQLSHAANVLTRARNESGVVLSALSSVASRWISRKIFDWQSLCPDSNVRILGQEQEPRLGAEEVDFRITYGRRSHVHEHVAHLFTDWVVPACSPALISSRVPQCPQDILTFPLLNVEWEADYKASPQWKDWAKLISADGHQTFSGLSFTLSSSAIDAAANGRGFVLAQLSMVQEEVAAGTLIVPFDIRMRLPESYYLAWDRPALEKPFGLRFHKWLLGVARQQDAVSSPNANPV*