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SCNpilot_expt_1000_bf_scaffold_2026_curated_13

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 12159..12905

Top 3 Functional Annotations

Value Algorithm Source
nocP2; nopaline ABC transporter nucleotide-binding protein/ATPase (EC:3.6.3.21) similarity KEGG
DB: KEGG
  • Identity: 83.9
  • Coverage: 248.0
  • Bit_score: 422
  • Evalue 1.10e-115
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B419A similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 246.0
  • Bit_score: 428
  • Evalue 3.60e-117
ABC-type histidine transport system ATPase component {ECO:0000313|EMBL:EYR79373.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 248.0
  • Bit_score: 459
  • Evalue 3.50e-126

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
GTGCAGGACATCCACAAGCGGTTCGGCTCGCTCTCGGTGCTCAACGGCGTCAGCCTGACGGCCCAGCCGGGCGAGGTCGTGTCGATGATCGGCTCCTCCGGCTCCGGCAAGAGCACCTTCCTGCGCTGCCTCAACCTGCTGGAACAGCCGAACGACGGGCGCATCGTCATCGACGGCGAGGAAATCCGCATGAAGAAGGCGGCGGACGGCAGCGCCGCCCCGGCCGACATGCGCCAGGTCGAGCGCATCCGCTCGCGCGTCGGCATGGTGTTCCAGAACTTCAACCTCTGGCCGCACATGACCGTGCTCGAAAACATCGTCGAAGCGCCGCTGCATGTGCTGAAGGAGAGCAAGCAGGAGGCCGTCGACCACGCGCATGCGCTTTTGAAGAAGGTGGGCCTCTCGGAAAAACATGCGCAATATCCCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGCCGCCATCGCCCGCACGCTCGCCATGCGCCCGAAACTCATCCTGCTGGACGAACCGACCTCGGCGCTCGATCCCGAGCTGGTCGGCGAAGTCCTGCGGGTCATCCGGCAACTGGCCGAAGAAGGCAATACGATGATCCTCGTGACGCATGAAATGCAGTTCGCGCGCGAGGTCTCACACAAGATTCTCTTCCTCCACCAGGGAAAGGTCGAGGAAGAGGGTGCGCCGGCGGAGATATTCACCAATCCGCGCTCCGAACGCATGCGCCAGTTCCTGGCCCGTACGCTCTGA
PROTEIN sequence
Length: 249
VQDIHKRFGSLSVLNGVSLTAQPGEVVSMIGSSGSGKSTFLRCLNLLEQPNDGRIVIDGEEIRMKKAADGSAAPADMRQVERIRSRVGMVFQNFNLWPHMTVLENIVEAPLHVLKESKQEAVDHAHALLKKVGLSEKHAQYPGQLSGGQQQRAAIARTLAMRPKLILLDEPTSALDPELVGEVLRVIRQLAEEGNTMILVTHEMQFAREVSHKILFLHQGKVEEEGAPAEIFTNPRSERMRQFLARTL*