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SCNpilot_expt_1000_bf_scaffold_3351_curated_5

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 3649..5091

Top 3 Functional Annotations

Value Algorithm Source
DNA photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 476.0
  • Bit_score: 631
  • Evalue 2.90e-178
  • rbh
DNA photolyase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CJC9_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 476.0
  • Bit_score: 631
  • Evalue 9.20e-178
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KJF69296.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 474.0
  • Bit_score: 635
  • Evalue 5.20e-179

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Taxonomy

Rhizobium nepotum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
TTGGCCTCTCCTCCTCCCATCCTCCTGTGGTTCCGCAAGGATCTGCGTCTCGACGACAATCTGGCCCTGACGGCGGCCGTCGAAACCGGCCGGCCGGTGATCCCTGTCTATATCCTCGACGAGTCCGATGCGACAATCGCACCGCTTGGCGCCGCCCAACGCTGGTGGCTGCATCATTCGTTGAAAAGCCTGCGAAAATCCCTGCGCGCCACCGGCAATGATCTCCTCCTGCGGCGCGGCCCATCGGAAAAAATCCTGCAGGAACTGATCGACGCCACCGGCGCCGATACGATCTTCGCCAACCGCATCCATGAGCCGCAGCGGCTCGACCGGGAACGCGTCTTCGCGGAAGCGCAAAAACAACGCGGCCTGCGCTTCACCGCCTTTGCCGGGCAATTGCTGCACGATCCGCAGAGGCTGGCGACCGGCAGCGGCGGCGCCTTCCGGGTTTACACACCCTTCTGGAACGCCTTCCAGCGCCAGCACGAACCGCGCCCGCCGGTGGAGGCGCCTTCGTCGATCCCTGCTTTCCGTGCGCCGCCTGAGACGGACGATCTCGACGCCTGGAACTGCGTGCCTGCGAAACCGGACTGGGCCGCGCATTTTCCGCAAAGCTGGACGCCCGGCGAGGCCGCCGCCATCGATAAACTGGGACAGTTCCTCGATGGCCCATTGGACCGCTACAAGACGGATCGCGATTTTCCGGCGCGTCCGGCGACTTCACGTCTCTCCCCGCATCTGGCCCTCGGCGAAATCTCTCCCTTCCGTATCTGGGATGCCACGCGCGGCCTGGGCGACATCCCGCGCGAAGACCTGATCCATTTCCGCAAGGAACTGGTCTGGCGCGAATTCTGCCATCACCTGCTTTTCCATTTTCCCGATCTTGCCGAAAAAAACTGGAATGCGCGTTTCGACGCGCTGACCTGGCAGGAGGACTCCCGGCGCTTCGGGGCATGGACCCGCGGGATGACCGGCTATCCCATCGTCGATGCCGGCATGCGCCAGCTCTGGCGCGACGGCATCATGCACAACCGGGTGCGGATGATCGTCGGCTCCTTCCTCGTCAAGGATCTGCTGATCGACTGGCGACAGGGCGAACGCTGGTTCCGCGACACGCTGGTGGATGCCGACCCCGCCTCCAACCCCGCCAACTGGCAATGGGTGGCGGGCACCGGCGCCGATGCCTCGCCTTTCTTCCGGGTGTTCAACCCGATACTCCAAGGCGAGAAATTCGATGCATCGGGGGACTACGTGCGTAGCTTCGTGACGGAAATCGCCGGCCTGCCGGACAAGTTCATCCACCGTCCTTTCGAAGCGCCGGCCGAGGTGCTGCGCAAGGCCGGCATCGAATTGGGCGTCACCTACCCTCGCCCGATCGTCGATCATGCGCAGGCGCGTCAGCGGGCGCTGGGAGCCTATGAGGCAGTCAAGCGGACAGCGTGA
PROTEIN sequence
Length: 481
LASPPPILLWFRKDLRLDDNLALTAAVETGRPVIPVYILDESDATIAPLGAAQRWWLHHSLKSLRKSLRATGNDLLLRRGPSEKILQELIDATGADTIFANRIHEPQRLDRERVFAEAQKQRGLRFTAFAGQLLHDPQRLATGSGGAFRVYTPFWNAFQRQHEPRPPVEAPSSIPAFRAPPETDDLDAWNCVPAKPDWAAHFPQSWTPGEAAAIDKLGQFLDGPLDRYKTDRDFPARPATSRLSPHLALGEISPFRIWDATRGLGDIPREDLIHFRKELVWREFCHHLLFHFPDLAEKNWNARFDALTWQEDSRRFGAWTRGMTGYPIVDAGMRQLWRDGIMHNRVRMIVGSFLVKDLLIDWRQGERWFRDTLVDADPASNPANWQWVAGTGADASPFFRVFNPILQGEKFDASGDYVRSFVTEIAGLPDKFIHRPFEAPAEVLRKAGIELGVTYPRPIVDHAQARQRALGAYEAVKRTA*