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SCNpilot_expt_1000_bf_scaffold_3351_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3351_curated_1
Brucella abortus, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(55..678)
DNA (624bp) protein (208aa)
Uncharacterized protein n=20 Tax=Brucella suis RepID=N7QGL8_BRUSS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEX56601.1}; TaxID=520452 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella abortus bv. 4 str. 292.;"
SCNpilot_expt_1000_bf_scaffold_3351_curated_2
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2258..2785)
DNA (528bp) protein (176aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
msrA; methionine sulfoxide reductase A (EC:1.8.4.11); K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] rbh
methionine sulfoxide reductase A n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037D9E1D
SCNpilot_expt_1000_bf_scaffold_3351_curated_3
unknown

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2972..3148
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3351_curated_4
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3362..3559
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF122 RepID=J2IUI8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJL52393.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3351_curated_5
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3649..5091
DNA (1443bp) protein (481aa)
DNA photolyase; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] rbh
DNA photolyase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CJC9_AGRT5
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KJF69296.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
SCNpilot_expt_1000_bf_scaffold_3351_curated_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5227..6486
DNA (1260bp) protein (420aa)
cyclopropane-fatty-acyl-phospholipid synthase; K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhizobium giardinii RepID=UPI00037869DD
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AHK44365.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_expt_1000_bf_scaffold_3351_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6622..7659
DNA (1038bp) protein (346aa)
cysB; cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
cysteine synthase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A5248
Cysteine synthase {ECO:0000313|EMBL:AHF83637.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_expt_1000_bf_scaffold_3351_curated_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7666..8403
DNA (738bp) protein (246aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K07050
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain containing protein n=1 Tax=Rhizobium sp. CF142 RepID=J2L8Y6_9RHIZ
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain containing protein {ECO:0000313|EMBL:EJJ29987.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_expt_1000_bf_scaffold_3351_curated_9
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8440..9306
DNA (867bp) protein (289aa)
sseA; thiosulfate sulfurtransferase (EC:2.8.1.1); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
Thiosulfate sulfurtransferase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PXP4_RHIE6
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
SCNpilot_expt_1000_bf_scaffold_3351_curated_10
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9309..9860
DNA (552bp) protein (184aa)
acetyltransferase n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000379F59A
Acetyltransferase {ECO:0000313|EMBL:AHF83634.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_3351_curated_11
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9861..10166)
DNA (306bp) protein (102aa)
Exopolysaccharide synthesis protein, ExoD n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A627_RHIFH
Protein exod {ECO:0000313|EMBL:KDP70708.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
exoD; exopolysaccharide synthesis protein, ExoD
Displaying 11 items

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