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SCNpilot_expt_1000_bf_scaffold_6703_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: 424..612

Top 3 Functional Annotations

Value Algorithm Source
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 2 {ECO:0000313|EMBL:CDN95207.1}; EC=1.1.1.127 {ECO:0000313|EMBL:CDN95207.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 61.0
  • Bit_score: 77
  • Evalue 9.40e-12
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036587ED similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 61.0
  • Bit_score: 70
  • Evalue 6.30e-10

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 189
ATGGCGGGGCTCGGTTTCGAAAGCGGCGGCCTTTCGGTCCCGCATGCCCTCGGTCTCGACCAAGATGCGGATCTCGGCCCGGCCGTCGCCTTCCGCAAGGTCGACCTGACCGATACGGCCGCAAGCATCGCCGCACTGCCGGAAGGGCGGCCAGTCGCCGGCCTCGTCAACTGCGCCGGTATCCGATGA
PROTEIN sequence
Length: 63
MAGLGFESGGLSVPHALGLDQDADLGPAVAFRKVDLTDTAASIAALPEGRPVAGLVNCAGIR*