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SCNpilot_expt_1000_bf_scaffold_6703_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6703_curated_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..171
DNA (171bp) protein (57aa)
Hydrolase of the alpha/beta superfamily-like protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZZ54_RHILW
alpha/beta superfamily-like hydrolase; K06889
Hydrolase of the alpha/beta superfamily-like protein {ECO:0000313|EMBL:ACI56197.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_expt_1000_bf_scaffold_6703_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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424..612
DNA (189bp) protein (63aa)
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase 2 {ECO:0000313|EMBL:CDN95207.1}; EC=1.1.1.127 {ECO:0000313|EMBL:CDN95207.1};; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036587ED
SCNpilot_expt_1000_bf_scaffold_6703_curated_3
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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718..1344
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J3BZC2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EUB98092.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6703_curated_4
unknown

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comp(1887..2441)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6703_curated_5
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3030..4517
DNA (1488bp) protein (496aa)
tms2; indole acetimide hydrolase; K01463 [EC:3.5.1.-] rbh
Indole acetimide hydrolase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P009_9RHOB
Indole acetimide hydrolase {ECO:0000313|EMBL:EAV41726.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
SCNpilot_expt_1000_bf_scaffold_6703_curated_6
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4616..5347
DNA (732bp) protein (244aa)
Transcriptional regulatory protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P010_9RHOB
Transcriptional regulatory protein {ECO:0000313|EMBL:EAV41727.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_6703_curated_7
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5375..6331)
DNA (957bp) protein (319aa)
Peptide ABC transporter, ATP-binding protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JQ55_AGRRK
Putative dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAJ96781.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
peptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
Displaying 7 items

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