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SCNpilot_expt_1000_bf_scaffold_5561_curated_1

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1..954)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TraG n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HPV4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.5
  • Coverage: 318.0
  • Bit_score: 636
  • Evalue 1.50e-179
Conjugal transfer protein TraG {ECO:0000313|EMBL:EQA99588.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.5
  • Coverage: 318.0
  • Bit_score: 636
  • Evalue 2.00e-179
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 318.0
  • Bit_score: 604
  • Evalue 2.50e-170

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Taxonomy

Sphingobium quisquiliarum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGTCGGCCACCAAAATCCTCTGGGGTCAGATCCTCACTGTCTTTCTGATCGTGCTTGCCACCACCTGGGGCGCCACCGAATATGTCGCGTGGAAGCTCGGCTTCCAGGCGCAGCTCGGGCCGCCGTGGTTCACTGTTCTCGGTTGGCCTTTCTACCTGCCGCCGGCCTTTTTCTGGTGGTGGTATTTCTACGATGCCTACGCACCGGACATCTTCACGAAAGGCGCGTTCATCGCCGCCTCCGGAGGCTTTATCGCCGTGGCCGTCGCCATCGGCATGTCGGTCTGGCGGGCGCGTGAGGCGAAGAAGGTCGAAACCTACGGCTCCGCCCGCTGGGCCGAAAGGCAAGAGGTAACGGACGCCGGGCTCCTCGGCCCCGATGGCGTGGTGCTCGGCAAACTCGATCGCGACTACCTGCGCCACGACGGGCCGGAGCATGTGCTGTGCTTCGCACCGACGCGATCCGGTAAGGGCGTCGGCCTGGTCGTGCCCTCGCTGCTGACCTGGCCGGGCTCGGCGATCGTCCACGACATCAAGGGCGAGAATTGGCAGCTCACCGCCGGCTTCCGCGCCCGGCACGGCCGCGTGCTGCTGTTCGATCCGACCAATGCGAAGTCCTCCGCCTATAATCCCCTGCTCGAAGTCCGCCGCGGCGAATGGGAGGTGCGCGACGTCCAGAACATTGCCGACATCCTGGTCGATCCGGAAGGCAGCCTTGAGAAGCGGAACCATTGGGAGAAGACCAGCCACGCGCTTCTGGTCGGCGCGATCCTCCATGTCCTCTATGCGGAAGAAGACAAGACGCTCGCCGGTGTCGCGGCTTTCCTCTCCGATCCCAAGCGGCCGATCGAATCGACGCTCGCCGCGATGATGAAGACGGCGCATCTCGGCGAGGCCGGGCCGCATCCGGTCATCGCCAGCGCCGCGCGTGAGTTGCTCAACAAATCCGACAAT
PROTEIN sequence
Length: 318
MSATKILWGQILTVFLIVLATTWGATEYVAWKLGFQAQLGPPWFTVLGWPFYLPPAFFWWWYFYDAYAPDIFTKGAFIAASGGFIAVAVAIGMSVWRAREAKKVETYGSARWAERQEVTDAGLLGPDGVVLGKLDRDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKGENWQLTAGFRARHGRVLLFDPTNAKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLEKRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIESTLAAMMKTAHLGEAGPHPVIASAARELLNKSDN