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SCNpilot_expt_1000_bf_scaffold_8245_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(1278..2060)

Top 3 Functional Annotations

Value Algorithm Source
Glycerol-3-phosphate regulon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTD7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 260.0
  • Bit_score: 400
  • Evalue 1.10e-108
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR83941.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 260.0
  • Bit_score: 400
  • Evalue 1.50e-108
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 260.0
  • Bit_score: 388
  • Evalue 1.80e-105

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGACCGACGCTTCCGATTCCCGCGCGCTGGCGCCCCGCCGCCATGACGAGATCCTCAAACGCCTGGCGGCCGACGGATCGGTCAGCATCGCCGCGCTCTCCGCCTTCTTCAACGTCTCGCGCGAAACCATCCGCCGCGACCTGAAGCAGCTTGCCGATCGCGGCCAGCTCGGCCTCGTGCATGGCGGGGCGACGCTGTTCGAGCCGACCGAGCCGGCATTGACCCAGCGCGCCCAGGAAAACAGCCTTGCCAAGGCGGCGATCGGCCGCGCGGCGGCGGGGCTGGTGCGCGACGGCATGGTGGTGCTGATCGATTCCGGAACCACGACGCTGGCGGTGGCGCAGGCGCTTTCCGGCTTGAAAAACCTGACGGTTTGCACGCCCAGCCTGACGATTGCCCTGCTGCTCTGCCGCCAGCCCTCGACGCGGGTGCATATGCTCGGCGGCGAGATCGATTCCGGCGAAGAGGCGGCGGTCGGCATCGATGCGCTGGAGGCCATCGGCCGGTTCCGCGTCGATATCGCCTTCGTCGGCGGCGGCGGGCTGTCGCCGGATGGCGAAGTCACCGATTTCACCCGCAACGGCGCCGAGCAGCGCTCGCGTATGATCGCCGCGGCCGAACGCGCCTATTTCGTGCTCGACAGTTCGAAATTCGGACGTCTGACGCCGTTGCGCATTCCGCGCTTCGAACTGGCGGCCGGGCTGATCACCGATGCCGCGCCGCCGGCGGCGATTGGCGAGGCGATGGTGCGCAAGGGACCGAAGCTGATCGTTGCGACGTGA
PROTEIN sequence
Length: 261
MTDASDSRALAPRRHDEILKRLAADGSVSIAALSAFFNVSRETIRRDLKQLADRGQLGLVHGGATLFEPTEPALTQRAQENSLAKAAIGRAAAGLVRDGMVVLIDSGTTTLAVAQALSGLKNLTVCTPSLTIALLLCRQPSTRVHMLGGEIDSGEEAAVGIDALEAIGRFRVDIAFVGGGGLSPDGEVTDFTRNGAEQRSRMIAAAERAYFVLDSSKFGRLTPLRIPRFELAAGLITDAAPPAAIGEAMVRKGPKLIVAT*