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SCNpilot_expt_1000_bf_scaffold_8245_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_8245_curated_1
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1190)
DNA (1188bp) protein (396aa)
FAD dependent oxidoreductase n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UJ25_SINMW
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ABR63655.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_expt_1000_bf_scaffold_8245_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1278..2060)
DNA (783bp) protein (261aa)
Glycerol-3-phosphate regulon repressor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTD7_9RHIZ
Glycerol-3-phosphate regulon repressor {ECO:0000313|EMBL:EYR83941.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
DeoR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8245_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2319..3356
DNA (1038bp) protein (346aa)
HTH-type transcriptional regulator CdhR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D2F8_9RHIZ
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:EYR83942.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_8245_curated_4
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3430..4197)
DNA (768bp) protein (256aa)
Ferric transport system permease protein FbpB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEF0_9RHIZ
Iron ABC transporter permease {ECO:0000313|EMBL:KJF67963.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
binding-protein-dependent transport system inner membrane protein; K02011 iron(III) transport system permease protein
SCNpilot_expt_1000_bf_scaffold_8245_curated_5
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5413..5697)
DNA (285bp) protein (95aa)
ABC transporter-like protein; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30]
Fe(3+) ions import ATP-binding protein FbpC 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EVU3_9RHIZ
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP74635.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
SCNpilot_expt_1000_bf_scaffold_8245_curated_6
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5813..6664
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa HB15 RepID=V4N2T0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:AHB54963.1}; TaxID=1415629 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa MTB-1.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_8245_curated_7
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6634..7656)
DNA (1023bp) protein (341aa)
Putative iron uptake ABC transporter periplasmic solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYN2_9RHIZ
Phosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDP74636.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
iron uptake ABC transporter substrate-binding protein precursor
SCNpilot_expt_1000_bf_scaffold_8245_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7898..9352)
DNA (1455bp) protein (485aa)
Lactaldehyde dehydrogenase {ECO:0000313|EMBL:EYR81468.1}; EC=1.2.1.22 {ECO:0000313|EMBL:EYR81468.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
phosphonoacetaldehyde dehydrogenase (EC:1.2.1.22)
Lactaldehyde dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D3C6_9RHIZ
SCNpilot_expt_1000_bf_scaffold_8245_curated_9
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9365..9514)
DNA (150bp) protein (50aa)
Phosphonoacetate hydrolase PhnA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUD3_9RHIZ
Phosphonoacetate hydrolase {ECO:0000313|EMBL:KDP74638.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
probabable phosphonoacetate hydrolase
Displaying 9 items

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