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SCNpilot_expt_1000_bf_scaffold_4477_curated_2

Organism: scnpilot_dereplicated_Rhizobiales_12

near complete RP 44 / 55 MC: 2 BSCG 46 / 51 MC: 5 ASCG 10 / 38 MC: 2
Location: comp(298..1179)

Top 3 Functional Annotations

Value Algorithm Source
sn-glycerol-3-phosphate ABC transporter membrane protein n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XQU8_RHIRD similarity UNIREF
DB: UNIREF100
  • Identity: 81.6
  • Coverage: 293.0
  • Bit_score: 498
  • Evalue 4.40e-138
Glycerol-3-phosphate transporter permease {ECO:0000313|EMBL:EPR21493.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 293.0
  • Bit_score: 498
  • Evalue 6.10e-138
Putative sugar ABC transporter (permease protein); putative glycerol 3-phosphate transport protein, ugpA-like protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 293.0
  • Bit_score: 493
  • Evalue 5.80e-137

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 882
ATGAAGCGCGCCCAGTTTTCGTCCAGCCTACTTCCCTATCTTTTCCTGGCGCCGCAGCTCGCGGTGATCTTCATTTTCTTCTACTGGCCCTCGGCCGAGGCGATCCGCTCCTCCTTCTTCCTGGAGGATCCCTTCGGCTTCGGCTCGACCTTCGTCGGCTTCCAGAACTATATCGATACGCTCACCTCGCCCGAATACCTCGGCATTGCCGCCTTCACGGCGTTGTTCACGGTGCTCGTCACCTTCTTTTCGCTGGCGGCAGGCCTGCTGCTGGCCGTCAAGGCCGACAAGGTCATTCGCGGCAGTTCTGCTTACAAGACTCTGCTGATCTCGGTCTATGCCATCGCTCCCCCGGTCGCAGGCCTGATCGGCATGATGTTCTTCGACCAGCATATCGGCCCCTTCGTCCGCCTCGCCGCTTTGTTCGGCTGGGAAATGAAGGTGGGCCTGAATTACTGGGACACGACGTTTGCCATGGTTTTCGTCGCCGTGTGGAAGCAGATCCCCTATAACTTCATCTTCTTCCTCTCCGGCCTGCAAAGCATCCCGGCCTCGGTGCTGGAAGCGGCGGTCATCGATTGCCGCAACGGTCTGCGCCGCTTCTGGACGGTGCTGGCGCCGCTCCTGACGCCGACCGCCTTCTTCCTGCTGATCATCAATTTCACCTATGCCCTGTTCGATACCTTCGGCGTCATCGACGTGATGGTGAAGGACAAGGCCGCCAACAATCCGATCACCTTGACCTACAAGGTCTACATGGACGGTTTTCGCGGCAACGATCTCGGCGGCTCCTCGGCGCAATCGGTCATTCTGATGGTCGTCGTGCTGGTGCTGACCGTCTTCCAGTTCCGCTTCCTGGAACGCCGCGTGCATTACGGGTGA
PROTEIN sequence
Length: 294
MKRAQFSSSLLPYLFLAPQLAVIFIFFYWPSAEAIRSSFFLEDPFGFGSTFVGFQNYIDTLTSPEYLGIAAFTALFTVLVTFFSLAAGLLLAVKADKVIRGSSAYKTLLISVYAIAPPVAGLIGMMFFDQHIGPFVRLAALFGWEMKVGLNYWDTTFAMVFVAVWKQIPYNFIFFLSGLQSIPASVLEAAVIDCRNGLRRFWTVLAPLLTPTAFFLLIINFTYALFDTFGVIDVMVKDKAANNPITLTYKVYMDGFRGNDLGGSSAQSVILMVVVLVLTVFQFRFLERRVHYG*